Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 AL136982.5-201ENST00000605222 294 ntBASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 AP001527.2-201ENST00000614441 631 ntBASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 CICP6-201ENST00000457191 2729 ntBASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 APOC1-209ENST00000592885 562 ntTSL 3 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 GOLGA8UP-201ENST00000527159 1755 ntBASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 AC232323.1-201ENST00000540724 2099 ntBASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42BPBQ9Y5S2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 AC063952.3-201ENST00000467756 308 ntBASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 PRSS3P1-201ENST00000503996 742 ntBASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 AC022447.6-201ENST00000515522 438 ntBASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 GOLGA2P7-209ENST00000560408 745 ntBASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 COQ4-204ENST00000608951 781 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC21.61■■□□□ 1.05
CDC42BPBQ9Y5S2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms