Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 AGPAT5P1-201ENST00000455855 1019 ntBASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 LINC00634-202ENST00000505157 222 ntBASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 AC090505.1-201ENST00000430515 1834 ntBASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 DDX39AP1-201ENST00000445147 1181 ntBASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 SCARNA12-201ENST00000459155 270 ntBASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 AC005740.1-201ENST00000515639 522 ntBASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 KRT8P2-201ENST00000556193 944 ntBASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 RN7SL357P-201ENST00000581065 298 ntBASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC21.43■■□□□ 1.02
SHANK2Q9UPX8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 AC004837.1-201ENST00000446267 564 ntBASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 AC023824.1-201ENST00000562945 2975 ntBASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 AC019109.1-201ENST00000401725 1874 ntBASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 LINC00115-201ENST00000473798 1317 ntBASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHANK2Q9UPX8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 FGD5P1-202ENST00000614866 2498 ntBASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 RPL3P2-204ENST00000413027 1203 ntBASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 CSNK1G2P1-201ENST00000442675 955 ntBASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC21.41■■□□□ 1.02
SHANK2Q9UPX8 AC007250.1-201ENST00000608934 338 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms