Protein–RNA interactions for Protein: Q9UPV9

TRAK1, Trafficking kinesin-binding protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1Q9UPV9 KHSRPP1-201ENST00000427983 1768 ntBASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 MIR557-201ENST00000385239 98 ntBASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 AL512430.1-201ENST00000392575 860 ntBASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 RPSAP15-201ENST00000448168 861 ntBASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 CFL1-206ENST00000527344 962 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 SIGLEC18P-201ENST00000602271 909 ntBASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAK1Q9UPV9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 AC022532.1-201ENST00000624563 1728 ntBASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 AC015688.4-201ENST00000580780 1647 ntBASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 RPSAP31-201ENST00000416648 895 ntBASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 ST13P19-201ENST00000442505 1124 ntBASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 MIR4522-201ENST00000584932 87 ntBASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 AC018529.2-202ENST00000611482 3087 ntBASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAK1Q9UPV9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 AC018442.1-201ENST00000421439 2061 ntBASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAK1Q9UPV9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms