Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 AC026434.2-201ENST00000506094 1078 ntBASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 AC079328.1-201ENST00000560358 952 ntBASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 MIR3619-201ENST00000579667 83 ntBASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.79■□□□□ 0.28
HDAC6Q9UBN7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 FKBP4P6-201ENST00000457486 1332 ntBASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 MROH4P-201ENST00000431302 1578 ntBASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 ELK2AP-201ENST00000392510 1007 ntBASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 UPF3AP2-201ENST00000457924 1132 ntBASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 CHMP4BP1-201ENST00000556017 588 ntBASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 AC138627.1-207ENST00000641560 1006 ntBASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 CICP14-201ENST00000629111 2732 ntBASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 CICP11-201ENST00000434745 2827 ntBASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDAC6Q9UBN7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 AL360270.3-201ENST00000609118 1348 ntBASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 ZBED1P1-201ENST00000502364 1930 ntBASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC6Q9UBN7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms