Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.64□□□□□ -0.23
LRFN1Q9P244 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRFN1Q9P244 E2F3P2-201ENST00000447755 1422 ntBASIC13.64□□□□□ -0.23
LRFN1Q9P244 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 AC006058.4-201ENST00000624016 1670 ntBASIC13.63□□□□□ -0.23
LRFN1Q9P244 LINC02228-204ENST00000642115 2962 ntBASIC13.63□□□□□ -0.23
LRFN1Q9P244 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 FAM58BP-201ENST00000439056 645 ntBASIC13.63□□□□□ -0.23
LRFN1Q9P244 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 BNIP3P13-201ENST00000599968 566 ntBASIC13.63□□□□□ -0.23
LRFN1Q9P244 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 AC022748.3-201ENST00000621828 275 ntBASIC13.63□□□□□ -0.23
LRFN1Q9P244 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 AC092384.3-202ENST00000564646 2873 ntBASIC13.63□□□□□ -0.23
LRFN1Q9P244 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 AL109954.1-202ENST00000564051 2148 ntBASIC13.63□□□□□ -0.23
LRFN1Q9P244 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.63□□□□□ -0.23
LRFN1Q9P244 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRFN1Q9P244 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRFN1Q9P244 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRFN1Q9P244 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.62□□□□□ -0.23
LRFN1Q9P244 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.62□□□□□ -0.23
LRFN1Q9P244 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRFN1Q9P244 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRFN1Q9P244 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LRFN1Q9P244 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRFN1Q9P244 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LRFN1Q9P244 AC004899.1-201ENST00000424687 1714 ntBASIC13.62□□□□□ -0.23
LRFN1Q9P244 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRFN1Q9P244 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRFN1Q9P244 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRFN1Q9P244 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms