Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 HLA-K-203ENST00000430151 1046 ntBASIC18.3■□□□□ 0.52
UPF2Q9HAU5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 AC010336.2-201ENST00000564226 506 ntBASIC18.3■□□□□ 0.52
UPF2Q9HAU5 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 LSS-211ENST00000522411 2523 ntTSL 2 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 AC012617.1-204ENST00000586340 2305 ntBASIC18.29■□□□□ 0.52
UPF2Q9HAU5 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 MAPT-IT1-201ENST00000624111 3016 ntBASIC18.29■□□□□ 0.52
UPF2Q9HAU5 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 FP325330.2-201ENST00000624219 5630 ntBASIC18.29■□□□□ 0.52
UPF2Q9HAU5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 POLD2P1-201ENST00000511220 997 ntBASIC18.29■□□□□ 0.52
UPF2Q9HAU5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 TEX28P1-201ENST00000613479 1221 ntBASIC18.29■□□□□ 0.52
UPF2Q9HAU5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 TEX28P2-201ENST00000617764 1221 ntBASIC18.29■□□□□ 0.52
UPF2Q9HAU5 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.29■□□□□ 0.52
UPF2Q9HAU5 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 AC093525.8-201ENST00000624099 1342 ntBASIC18.28■□□□□ 0.52
UPF2Q9HAU5 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 YBX1P5-201ENST00000509441 847 ntBASIC18.28■□□□□ 0.52
UPF2Q9HAU5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.28■□□□□ 0.52
UPF2Q9HAU5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 1598.1 ms