Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDH11XQ9BZA7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 BCAS2P2-201ENST00000425064 674 ntBASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 OR5BD1P-201ENST00000532527 817 ntBASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 AC140658.4-201ENST00000561990 352 ntBASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 LINC00431-202ENST00000636375 159 ntBASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PCDH11XQ9BZA7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 AC006372.4-201ENST00000624122 1543 ntBASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 AC018638.5-201ENST00000450885 754 ntBASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 AC026410.1-201ENST00000507366 1101 ntBASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 AC084752.1-201ENST00000509766 622 ntBASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDH11XQ9BZA7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 LAP3P2-201ENST00000454686 1454 ntBASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 AREG-202ENST00000502307 956 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 C2orf69P1-201ENST00000563532 1093 ntBASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms