Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 MIR1301-201ENST00000408518 82 ntBASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 FAM58BP-201ENST00000439056 645 ntBASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 AL358472.3-201ENST00000608147 415 ntBASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 AC002044.2-201ENST00000624910 970 ntBASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 AC021305.1-201ENST00000520656 1514 ntBASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 HLA-DMA-203ENST00000395305 777 ntBASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 EIF3FP3-201ENST00000434851 1086 ntBASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 RPL3P5-201ENST00000441645 1232 ntBASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 AC006529.1-201ENST00000459978 637 ntBASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 AC092612.1-201ENST00000514501 998 ntBASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 TREHP1-201ENST00000531328 465 ntBASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 URB1-AS1-201ENST00000534991 831 ntBASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 DUX4L46-201ENST00000566845 751 ntBASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 AP000322.3-201ENST00000608665 388 ntBASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 PHF23-213ENST00000613632 850 ntTSL 5 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNTNAP3Q9BZ76 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms