Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC007250.1-201ENST00000608934 338 ntBASIC17.72■□□□□ 0.43
RTFDC1Q9BY42 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RTFDC1Q9BY42 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTFDC1Q9BY42 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTFDC1Q9BY42 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTFDC1Q9BY42 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTFDC1Q9BY42 AC022532.1-201ENST00000624563 1728 ntBASIC17.72■□□□□ 0.43
RTFDC1Q9BY42 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RTFDC1Q9BY42 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTFDC1Q9BY42 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTFDC1Q9BY42 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RTFDC1Q9BY42 CICP23-201ENST00000605013 2741 ntBASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 MIR645-201ENST00000385283 94 ntBASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 AC092580.1-201ENST00000433998 658 ntBASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 AL139008.1-201ENST00000437894 228 ntBASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 AC018638.5-201ENST00000450885 754 ntBASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 AP000322.3-201ENST00000608665 388 ntBASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 AC009145.4-201ENST00000625119 1294 ntBASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTFDC1Q9BY42 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RTFDC1Q9BY42 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.42
RTFDC1Q9BY42 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.71■□□□□ 0.42
RTFDC1Q9BY42 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 PSMD4P1-201ENST00000433951 1109 ntBASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 HERC2P11-201ENST00000562845 725 ntBASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 AC100756.2-201ENST00000569537 736 ntBASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 NAMA-206ENST00000605377 509 ntTSL 5 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 AC138466.4-201ENST00000623965 852 ntBASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.7■□□□□ 0.42
RTFDC1Q9BY42 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 AC006486.2-201ENST00000624246 2199 ntBASIC17.69■□□□□ 0.42
RTFDC1Q9BY42 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms