Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
GFI1Q99684 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFI1Q99684 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GFI1Q99684 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GFI1Q99684 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFI1Q99684 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFI1Q99684 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFI1Q99684 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFI1Q99684 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.79□□□□□ -0.36
GFI1Q99684 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.79□□□□□ -0.36
GFI1Q99684 KRT18P13-201ENST00000400056 1290 ntBASIC12.79□□□□□ -0.36
GFI1Q99684 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.79□□□□□ -0.36
GFI1Q99684 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.79□□□□□ -0.36
GFI1Q99684 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.79□□□□□ -0.36
GFI1Q99684 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.79□□□□□ -0.36
GFI1Q99684 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
GFI1Q99684 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.79□□□□□ -0.36
GFI1Q99684 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.79□□□□□ -0.36
GFI1Q99684 AC103988.2-201ENST00000561804 725 ntBASIC12.79□□□□□ -0.36
GFI1Q99684 AC009407.1-201ENST00000568958 598 ntBASIC12.79□□□□□ -0.36
GFI1Q99684 SPDYE22P-201ENST00000582158 798 ntBASIC12.79□□□□□ -0.36
GFI1Q99684 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.79□□□□□ -0.36
GFI1Q99684 AC004790.1-201ENST00000612686 536 ntBASIC12.79□□□□□ -0.36
GFI1Q99684 BX539320.1-201ENST00000623759 877 ntBASIC12.79□□□□□ -0.36
GFI1Q99684 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.79□□□□□ -0.36
GFI1Q99684 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
GFI1Q99684 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFI1Q99684 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
GFI1Q99684 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
GFI1Q99684 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
GFI1Q99684 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFI1Q99684 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
GFI1Q99684 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.79□□□□□ -0.36
GFI1Q99684 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.79□□□□□ -0.36
GFI1Q99684 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.79□□□□□ -0.36
GFI1Q99684 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
GFI1Q99684 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.79□□□□□ -0.36
GFI1Q99684 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GFI1Q99684 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
GFI1Q99684 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFI1Q99684 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.79□□□□□ -0.36
GFI1Q99684 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GFI1Q99684 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
GFI1Q99684 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.78□□□□□ -0.36
GFI1Q99684 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
GFI1Q99684 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.78□□□□□ -0.36
GFI1Q99684 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
GFI1Q99684 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.78□□□□□ -0.36
GFI1Q99684 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.78□□□□□ -0.36
GFI1Q99684 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
GFI1Q99684 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
GFI1Q99684 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.78□□□□□ -0.36
GFI1Q99684 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.78□□□□□ -0.36
GFI1Q99684 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 AC009477.1-201ENST00000452936 217 ntBASIC12.78□□□□□ -0.36
GFI1Q99684 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.78□□□□□ -0.36
GFI1Q99684 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.78□□□□□ -0.36
GFI1Q99684 AC069120.2-201ENST00000524091 540 ntBASIC12.78□□□□□ -0.36
GFI1Q99684 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.78□□□□□ -0.36
GFI1Q99684 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.78□□□□□ -0.36
GFI1Q99684 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.78□□□□□ -0.36
GFI1Q99684 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
GFI1Q99684 SRD5A3P1-201ENST00000603021 949 ntBASIC12.78□□□□□ -0.36
GFI1Q99684 AC093813.1-201ENST00000605066 256 ntBASIC12.78□□□□□ -0.36
GFI1Q99684 AP001002.3-201ENST00000623482 206 ntBASIC12.78□□□□□ -0.36
GFI1Q99684 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
GFI1Q99684 AL138725.1-201ENST00000407347 1314 ntBASIC12.78□□□□□ -0.36
GFI1Q99684 TUBB8P4-201ENST00000511806 1324 ntBASIC12.78□□□□□ -0.36
GFI1Q99684 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 KHSRPP1-201ENST00000427983 1768 ntBASIC12.78□□□□□ -0.36
GFI1Q99684 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.78□□□□□ -0.36
GFI1Q99684 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
GFI1Q99684 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.78□□□□□ -0.36
GFI1Q99684 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.78□□□□□ -0.36
GFI1Q99684 AC100757.3-201ENST00000622361 1406 ntBASIC12.78□□□□□ -0.36
GFI1Q99684 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
GFI1Q99684 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFI1Q99684 AL365181.3-201ENST00000605886 3222 ntBASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms