Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 IGHV3-65-201ENST00000523210 341 ntBASIC14.04□□□□□ -0.16
NR1H4Q96RI1 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 AL121912.1-201ENST00000603683 238 ntBASIC14.04□□□□□ -0.16
NR1H4Q96RI1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 AL031719.1-201ENST00000623365 2587 ntBASIC14.04□□□□□ -0.16
NR1H4Q96RI1 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NR1H4Q96RI1 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.03□□□□□ -0.16
NR1H4Q96RI1 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 CLK3P2-201ENST00000427566 1453 ntBASIC14.03□□□□□ -0.16
NR1H4Q96RI1 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H4Q96RI1 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NR1H4Q96RI1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 AC108073.2-201ENST00000464002 357 ntBASIC14.02□□□□□ -0.17
NR1H4Q96RI1 AC092910.1-201ENST00000482027 1129 ntBASIC14.02□□□□□ -0.17
NR1H4Q96RI1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms