Protein–RNA interactions for Protein: Q96FZ2

HMCES, Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein, humanhuman

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCESQ96FZ2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 AL590440.2-201ENST00000641973 1595 ntBASIC15.12■□□□□ 0.01
HMCESQ96FZ2 E2F3P2-201ENST00000447755 1422 ntBASIC15.12■□□□□ 0.01
HMCESQ96FZ2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 Z93015.1-201ENST00000451718 390 ntBASIC15.12■□□□□ 0.01
HMCESQ96FZ2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 AC103988.2-201ENST00000561804 725 ntBASIC15.12■□□□□ 0.01
HMCESQ96FZ2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 AC139712.1-201ENST00000378256 1875 ntBASIC15.12■□□□□ 0.01
HMCESQ96FZ2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMCESQ96FZ2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 MTX1P1-201ENST00000440904 838 ntBASIC15.11■□□□□ 0.01
HMCESQ96FZ2 GOLGA2P4-201ENST00000441462 777 ntBASIC15.11■□□□□ 0.01
HMCESQ96FZ2 CICP12-201ENST00000455801 843 ntBASIC15.11■□□□□ 0.01
HMCESQ96FZ2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 RPSAP36-202ENST00000494591 1261 ntBASIC15.11■□□□□ 0.01
HMCESQ96FZ2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 AC008825.2-201ENST00000603374 718 ntBASIC15.11■□□□□ 0.01
HMCESQ96FZ2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.11■□□□□ 0.01
HMCESQ96FZ2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 TUBB1P2-201ENST00000422712 1306 ntBASIC15.11■□□□□ 0.01
HMCESQ96FZ2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 TUBB1P1-201ENST00000503144 1300 ntBASIC15.11■□□□□ 0.01
HMCESQ96FZ2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
HMCESQ96FZ2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMCESQ96FZ2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMCESQ96FZ2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms