Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 UROS-201ENST00000368774 744 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 HLA-DPA2-205ENST00000433582 733 ntBASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 AC087481.3-201ENST00000602886 1894 ntBASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 ENPP7P8-202ENST00000527856 1345 ntBASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 MIR1301-201ENST00000408518 82 ntBASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 SERBP1P2-201ENST00000436888 1164 ntBASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 SCARNA12-201ENST00000459155 270 ntBASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 RBM4-207ENST00000506523 654 ntTSL 3 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM43Q96BQ3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM43Q96BQ3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms