Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SCG3Q8WXD2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.33■□□□□ 0.04
SCG3Q8WXD2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 VDAC1P7-201ENST00000462417 847 ntBASIC15.32■□□□□ 0.04
SCG3Q8WXD2 USP32P1-208ENST00000506594 1164 ntBASIC15.32■□□□□ 0.04
SCG3Q8WXD2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 MIR5189-201ENST00000577370 114 ntBASIC15.32■□□□□ 0.04
SCG3Q8WXD2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCG3Q8WXD2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.31■□□□□ 0.04
SCG3Q8WXD2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 AC005229.1-201ENST00000392885 409 ntBASIC15.31■□□□□ 0.04
SCG3Q8WXD2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 KLF2P4-201ENST00000451959 1225 ntBASIC15.31■□□□□ 0.04
SCG3Q8WXD2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 AP001063.1-201ENST00000568332 529 ntBASIC15.31■□□□□ 0.04
SCG3Q8WXD2 AC124283.3-201ENST00000570869 594 ntBASIC15.31■□□□□ 0.04
SCG3Q8WXD2 MIR6799-201ENST00000620297 69 ntBASIC15.31■□□□□ 0.04
SCG3Q8WXD2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 AP000845.1-201ENST00000581677 2131 ntBASIC15.31■□□□□ 0.04
SCG3Q8WXD2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.31■□□□□ 0.04
SCG3Q8WXD2 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms