Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 DUX4L27-201ENST00000554796 1261 ntBASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 AL390754.1-201ENST00000619088 582 ntBASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 C1QBPP1-201ENST00000400117 770 ntBASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 MEP1AP4-201ENST00000423244 1087 ntBASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 AC124283.3-201ENST00000570869 594 ntBASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC44A1Q8WWI5 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 GCOM2-201ENST00000509133 1104 ntBASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC44A1Q8WWI5 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms