Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 LINC00554-201ENST00000564841 3011 ntBASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 GGTLC4P-201ENST00000402176 664 ntBASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 AL080243.1-201ENST00000423293 1060 ntBASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 SLC25A15P1-201ENST00000456738 342 ntBASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 AC099328.1-201ENST00000498809 1030 ntBASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 SLC25A15P3-201ENST00000505530 290 ntBASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 AC093300.1-201ENST00000510368 1201 ntBASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 CD44-224ENST00000526669 870 ntTSL 5 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 AC120498.7-201ENST00000562876 330 ntBASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 AP001462.1-201ENST00000594089 452 ntBASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 EMP3-204ENST00000596315 761 ntTSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 AC087481.3-201ENST00000602886 1894 ntBASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 AC073210.1-201ENST00000414799 232 ntBASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 AC098657.1-201ENST00000416270 1135 ntBASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 AC000077.1-201ENST00000420012 953 ntBASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 RN7SL602P-201ENST00000578326 324 ntBASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 RN7SL718P-201ENST00000581254 303 ntBASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 AC087072.1-201ENST00000603727 421 ntBASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 GGNBP1-204ENST00000613113 887 ntBASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 AC106782.5-201ENST00000616011 337 ntBASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms