Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 E2F3P2-201ENST00000447755 1422 ntBASIC15.79■□□□□ 0.12
LMO3Q8TAP4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 AC063926.2-201ENST00000623766 1308 ntBASIC15.79■□□□□ 0.12
LMO3Q8TAP4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 AC099336.1-201ENST00000417053 1171 ntBASIC15.79■□□□□ 0.12
LMO3Q8TAP4 AL161932.2-201ENST00000435436 679 ntBASIC15.79■□□□□ 0.12
LMO3Q8TAP4 AL035414.1-201ENST00000451327 857 ntBASIC15.79■□□□□ 0.12
LMO3Q8TAP4 HOMER2P2-201ENST00000451621 847 ntBASIC15.79■□□□□ 0.12
LMO3Q8TAP4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 AC009955.4-201ENST00000597192 544 ntBASIC15.79■□□□□ 0.12
LMO3Q8TAP4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 AL023775.1-201ENST00000454907 1746 ntBASIC15.79■□□□□ 0.12
LMO3Q8TAP4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 TMBIM7P-202ENST00000641474 1516 ntBASIC15.78■□□□□ 0.12
LMO3Q8TAP4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 AC064801.2-201ENST00000625052 1303 ntBASIC15.78■□□□□ 0.12
LMO3Q8TAP4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.78■□□□□ 0.12
LMO3Q8TAP4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 AC234783.1-201ENST00000441761 496 ntBASIC15.78■□□□□ 0.12
LMO3Q8TAP4 CSF2RBP1-201ENST00000447905 391 ntBASIC15.78■□□□□ 0.12
LMO3Q8TAP4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 AC104989.1-201ENST00000519711 778 ntBASIC15.78■□□□□ 0.12
LMO3Q8TAP4 AC023310.1-201ENST00000554836 735 ntBASIC15.78■□□□□ 0.12
LMO3Q8TAP4 DUX4L46-201ENST00000566845 751 ntBASIC15.78■□□□□ 0.12
LMO3Q8TAP4 MIR4259-201ENST00000584466 101 ntBASIC15.78■□□□□ 0.12
LMO3Q8TAP4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 AC132192.2-201ENST00000596206 1147 ntBASIC15.78■□□□□ 0.12
LMO3Q8TAP4 AC104506.1-201ENST00000609247 429 ntBASIC15.78■□□□□ 0.12
LMO3Q8TAP4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LMO3Q8TAP4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms