Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIMC1Q8NDZ2 AP001267.2-201ENST00000532619 2086 ntBASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 INE2-201ENST00000630399 1874 ntBASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 AC092933.1-201ENST00000393644 945 ntBASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 ARSEP1-201ENST00000420443 635 ntBASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 FO681548.1-201ENST00000455617 1132 ntBASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 AC244669.2-201ENST00000612320 853 ntBASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 AC027612.1-201ENST00000445234 2395 ntBASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 AC018665.1-201ENST00000622927 1362 ntBASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIMC1Q8NDZ2 COL6A4P2-202ENST00000504443 2753 ntBASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 CROCCP4-201ENST00000457096 498 ntBASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms