Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKL3Q8IVW4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CDKL3Q8IVW4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDKL3Q8IVW4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.27■□□□□ 0.03
CDKL3Q8IVW4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDKL3Q8IVW4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDKL3Q8IVW4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKL3Q8IVW4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 CRB3P1-201ENST00000449338 276 ntBASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 AC010319.3-201ENST00000597028 470 ntBASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 AC090505.1-201ENST00000430515 1834 ntBASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.26■□□□□ 0.03
CDKL3Q8IVW4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 FTLP10-202ENST00000505798 471 ntBASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 MIR6074-201ENST00000612054 107 ntBASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 RPSAP52-203ENST00000622976 1023 ntBASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKL3Q8IVW4 AC006504.5-208ENST00000588784 2401 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms