Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 AC018463.1-201ENST00000456674 917 ntBASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 MIR6858-201ENST00000620733 67 ntBASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 AP001184.1-201ENST00000637936 376 ntBASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS4Q8IUM7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPAS4Q8IUM7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPAS4Q8IUM7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.71■□□□□ 0.1
NPAS4Q8IUM7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
NPAS4Q8IUM7 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
NPAS4Q8IUM7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NPAS4Q8IUM7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.71■□□□□ 0.1
NPAS4Q8IUM7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 KRT17P5-201ENST00000332088 839 ntBASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 MRPL22P1-201ENST00000505398 616 ntBASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 NUDT4P2-201ENST00000578341 546 ntBASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 AC084781.1-201ENST00000613737 656 ntBASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 AC025262.2-201ENST00000623975 1056 ntBASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms