Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 AC114501.2-201ENST00000439631 535 ntBASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 MEIS3P1-201ENST00000495167 958 ntBASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 AL671883.3-201ENST00000603274 991 ntBASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 AL596442.2-201ENST00000610240 980 ntBASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 MIR6074-201ENST00000612054 107 ntBASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 PRSS30P-206ENST00000641773 873 ntBASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 AC011498.7-201ENST00000624986 2027 ntBASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 AC112482.1-201ENST00000492080 688 ntBASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 AC090643.2-201ENST00000623442 2029 ntBASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRTM1Q86UE6 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms