Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 CTSL-202ENST00000342020 933 ntTSL 2 BASIC17.08■□□□□ 0.32
USP50Q70EL3 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
USP50Q70EL3 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
USP50Q70EL3 AC092570.1-201ENST00000414446 469 ntBASIC17.08■□□□□ 0.32
USP50Q70EL3 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC17.08■□□□□ 0.32
USP50Q70EL3 GALP-202ENST00000440823 889 ntTSL 5 BASIC17.08■□□□□ 0.32
USP50Q70EL3 HNRNPA1P42-201ENST00000458678 957 ntBASIC17.08■□□□□ 0.32
USP50Q70EL3 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.08■□□□□ 0.32
USP50Q70EL3 KRT18P37-201ENST00000520711 1282 ntBASIC17.08■□□□□ 0.32
USP50Q70EL3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 F11R-204ENST00000537746 1245 ntTSL 2 BASIC17.08■□□□□ 0.32
USP50Q70EL3 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC17.08■□□□□ 0.32
USP50Q70EL3 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC17.08■□□□□ 0.32
USP50Q70EL3 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC17.08■□□□□ 0.32
USP50Q70EL3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
USP50Q70EL3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.08■□□□□ 0.32
USP50Q70EL3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
USP50Q70EL3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
USP50Q70EL3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
USP50Q70EL3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.08■□□□□ 0.32
USP50Q70EL3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.07■□□□□ 0.32
USP50Q70EL3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
USP50Q70EL3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
USP50Q70EL3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.07■□□□□ 0.32
USP50Q70EL3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.07■□□□□ 0.32
USP50Q70EL3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
USP50Q70EL3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.07■□□□□ 0.32
USP50Q70EL3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
USP50Q70EL3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.07■□□□□ 0.32
USP50Q70EL3 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC17.07■□□□□ 0.32
USP50Q70EL3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.07■□□□□ 0.32
USP50Q70EL3 PSAT1P2-201ENST00000426107 972 ntBASIC17.07■□□□□ 0.32
USP50Q70EL3 AL512599.1-201ENST00000430724 685 ntBASIC17.07■□□□□ 0.32
USP50Q70EL3 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC17.07■□□□□ 0.32
USP50Q70EL3 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC17.07■□□□□ 0.32
USP50Q70EL3 RN7SL788P-201ENST00000460504 316 ntBASIC17.07■□□□□ 0.32
USP50Q70EL3 BCRP4-201ENST00000506079 804 ntBASIC17.07■□□□□ 0.32
USP50Q70EL3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.07■□□□□ 0.32
USP50Q70EL3 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC17.07■□□□□ 0.32
USP50Q70EL3 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.07■□□□□ 0.32
USP50Q70EL3 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC17.07■□□□□ 0.32
USP50Q70EL3 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
USP50Q70EL3 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC17.07■□□□□ 0.32
USP50Q70EL3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.07■□□□□ 0.32
USP50Q70EL3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.07■□□□□ 0.32
USP50Q70EL3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.07■□□□□ 0.32
USP50Q70EL3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.07■□□□□ 0.32
USP50Q70EL3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.07■□□□□ 0.32
USP50Q70EL3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.07■□□□□ 0.32
USP50Q70EL3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
USP50Q70EL3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.07■□□□□ 0.32
USP50Q70EL3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
USP50Q70EL3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
USP50Q70EL3 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP50Q70EL3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
USP50Q70EL3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
USP50Q70EL3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
USP50Q70EL3 LAP3P2-201ENST00000454686 1454 ntBASIC17.06■□□□□ 0.32
USP50Q70EL3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
USP50Q70EL3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.06■□□□□ 0.32
USP50Q70EL3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.06■□□□□ 0.32
USP50Q70EL3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP50Q70EL3 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP50Q70EL3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
USP50Q70EL3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP50Q70EL3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP50Q70EL3 FKBP4P8-201ENST00000610931 1369 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms