Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AL354702.1-201ENST00000442006 1960 ntBASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 AC136759.1-202ENST00000530858 2194 ntBASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 BEND3P1-201ENST00000421591 1944 ntBASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 BX640514.1-201ENST00000583223 1918 ntBASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 LRRC59-203ENST00000576448 1531 ntBASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 AC005229.1-201ENST00000392885 409 ntBASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 COX5BP8-201ENST00000416911 349 ntBASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 TLE1P1-201ENST00000422965 589 ntBASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 AC007389.4-201ENST00000454674 793 ntBASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 FO681548.1-201ENST00000455617 1132 ntBASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 INE1-201ENST00000456273 945 ntBASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 AC106760.1-201ENST00000508690 800 ntBASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 AC132938.2-201ENST00000579188 680 ntBASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 IGHV3-72-202ENST00000621503 303 ntBASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 AC132938.4-201ENST00000623835 848 ntBASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 AL591163.1-201ENST00000641757 987 ntBASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NHLRC1Q6VVB1 COL6A4P2-202ENST00000504443 2753 ntBASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 AL359183.1-201ENST00000623796 2132 ntBASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NHLRC1Q6VVB1 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms