Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 REEP5-205ENST00000504247 480 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 AP000911.2-201ENST00000534330 502 ntBASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 AC124068.2-201ENST00000569473 1109 ntBASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 AL590440.2-201ENST00000641973 1595 ntBASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 RN7SL277P-201ENST00000481521 288 ntBASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 NSD1-211ENST00000511258 809 ntTSL 3 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 KRT8P1-201ENST00000557533 1207 ntBASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 FO393412.1-201ENST00000619841 382 ntBASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 AC138466.5-201ENST00000624002 808 ntBASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 AL391005.1-201ENST00000623953 2435 ntBASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 LINC01815-202ENST00000641468 1409 ntBASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LYSMD4Q5XG99 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD4Q5XG99 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LYSMD4Q5XG99 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms