Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 AC009948.4-201ENST00000604692 675 ntBASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 AL353770.1-201ENST00000614915 403 ntBASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 TMBIM7P-202ENST00000641474 1516 ntBASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 EEF1DP6-201ENST00000449232 372 ntBASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 AC116345.2-201ENST00000512837 523 ntBASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 RTN3P1-201ENST00000536295 711 ntBASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 MIR4706-201ENST00000582134 82 ntBASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 AL157813.1-201ENST00000612996 587 ntBASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.31□□□□□ -0.28
RNFT1Q5M7Z0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.3□□□□□ -0.28
RNFT1Q5M7Z0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms