Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 AC026320.2-201ENST00000434379 478 ntBASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 RN7SL181P-201ENST00000462921 277 ntBASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 POU5F1P2-201ENST00000521750 823 ntBASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 MIR6769A-201ENST00000617340 73 ntBASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 AC026316.1-201ENST00000398900 414 ntBASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 RPL17P11-201ENST00000417593 544 ntBASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 AC008267.1-201ENST00000474858 1069 ntBASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 MIR7845-201ENST00000618396 99 ntBASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.13■□□□□ 0.33
SHROOM1Q2M3G4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 KHSRPP1-201ENST00000427983 1768 ntBASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 AC015688.4-201ENST00000580780 1647 ntBASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 RN7SL258P-201ENST00000478664 300 ntBASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 AC087045.2-201ENST00000606279 1003 ntBASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 AC092171.5-201ENST00000608012 942 ntBASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHROOM1Q2M3G4 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms