Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 AC023310.3-201ENST00000557027 670 ntBASIC12.94□□□□□ -0.34
UBA52P62987 AC100756.1-201ENST00000562736 682 ntBASIC12.94□□□□□ -0.34
UBA52P62987 AC138749.3-201ENST00000567691 622 ntBASIC12.94□□□□□ -0.34
UBA52P62987 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.94□□□□□ -0.34
UBA52P62987 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UBA52P62987 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 AC093726.1-201ENST00000608064 963 ntBASIC12.94□□□□□ -0.34
UBA52P62987 AC116165.1-201ENST00000611806 668 ntBASIC12.94□□□□□ -0.34
UBA52P62987 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UBA52P62987 AC127383.1-201ENST00000444697 1800 ntBASIC12.94□□□□□ -0.34
UBA52P62987 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.94□□□□□ -0.34
UBA52P62987 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.94□□□□□ -0.34
UBA52P62987 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
UBA52P62987 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UBA52P62987 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
UBA52P62987 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.94□□□□□ -0.34
UBA52P62987 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
UBA52P62987 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.94□□□□□ -0.34
UBA52P62987 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
UBA52P62987 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
UBA52P62987 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.93□□□□□ -0.34
UBA52P62987 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
UBA52P62987 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
UBA52P62987 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
UBA52P62987 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.93□□□□□ -0.34
UBA52P62987 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.93□□□□□ -0.34
UBA52P62987 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
UBA52P62987 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
UBA52P62987 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
UBA52P62987 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.93□□□□□ -0.34
UBA52P62987 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 AC234783.1-201ENST00000441761 496 ntBASIC12.93□□□□□ -0.34
UBA52P62987 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.93□□□□□ -0.34
UBA52P62987 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.93□□□□□ -0.34
UBA52P62987 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.93□□□□□ -0.34
UBA52P62987 AL139010.1-201ENST00000454878 894 ntBASIC12.93□□□□□ -0.34
UBA52P62987 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 ELK1P1-201ENST00000485699 580 ntBASIC12.93□□□□□ -0.34
UBA52P62987 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.93□□□□□ -0.34
UBA52P62987 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.93□□□□□ -0.34
UBA52P62987 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.93□□□□□ -0.34
UBA52P62987 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.93□□□□□ -0.34
UBA52P62987 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.93□□□□□ -0.34
UBA52P62987 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.93□□□□□ -0.34
UBA52P62987 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.93□□□□□ -0.34
UBA52P62987 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.93□□□□□ -0.34
UBA52P62987 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
UBA52P62987 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.93□□□□□ -0.34
UBA52P62987 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
UBA52P62987 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.93□□□□□ -0.34
UBA52P62987 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBA52P62987 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.93□□□□□ -0.34
UBA52P62987 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.92□□□□□ -0.34
UBA52P62987 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBA52P62987 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBA52P62987 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBA52P62987 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.92□□□□□ -0.34
UBA52P62987 AP001282.1-201ENST00000531301 1499 ntBASIC12.92□□□□□ -0.34
UBA52P62987 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms