Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
VSX2P58304 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
VSX2P58304 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VSX2P58304 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.26□□□□□ -0.13
VSX2P58304 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.26□□□□□ -0.13
VSX2P58304 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.26□□□□□ -0.13
VSX2P58304 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.26□□□□□ -0.13
VSX2P58304 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 MIR326-201ENST00000362220 95 ntBASIC14.26□□□□□ -0.13
VSX2P58304 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 AL136309.1-201ENST00000403917 691 ntBASIC14.26□□□□□ -0.13
VSX2P58304 TLE1P1-201ENST00000422965 589 ntBASIC14.26□□□□□ -0.13
VSX2P58304 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.26□□□□□ -0.13
VSX2P58304 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.26□□□□□ -0.13
VSX2P58304 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.26□□□□□ -0.13
VSX2P58304 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.26□□□□□ -0.13
VSX2P58304 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
VSX2P58304 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.26□□□□□ -0.13
VSX2P58304 EEF1DP1-201ENST00000585891 896 ntBASIC14.26□□□□□ -0.13
VSX2P58304 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.26□□□□□ -0.13
VSX2P58304 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.26□□□□□ -0.13
VSX2P58304 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VSX2P58304 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.26□□□□□ -0.13
VSX2P58304 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.26□□□□□ -0.13
VSX2P58304 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
VSX2P58304 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.26□□□□□ -0.13
VSX2P58304 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.26□□□□□ -0.13
VSX2P58304 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.26□□□□□ -0.13
VSX2P58304 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.26□□□□□ -0.13
VSX2P58304 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
VSX2P58304 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VSX2P58304 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VSX2P58304 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
VSX2P58304 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.25□□□□□ -0.13
VSX2P58304 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.25□□□□□ -0.13
VSX2P58304 MIR1908-201ENST00000410394 80 ntBASIC14.25□□□□□ -0.13
VSX2P58304 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.25□□□□□ -0.13
VSX2P58304 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VSX2P58304 HIST2H2BB-201ENST00000449108 381 ntBASIC14.25□□□□□ -0.13
VSX2P58304 AC092658.1-201ENST00000505836 891 ntBASIC14.25□□□□□ -0.13
VSX2P58304 FAM86HP-204ENST00000513466 959 ntBASIC14.25□□□□□ -0.13
VSX2P58304 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.25□□□□□ -0.13
VSX2P58304 AC002472.3-201ENST00000640124 621 ntBASIC14.25□□□□□ -0.13
VSX2P58304 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
VSX2P58304 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.25□□□□□ -0.13
VSX2P58304 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.25□□□□□ -0.13
VSX2P58304 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.25□□□□□ -0.13
VSX2P58304 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VSX2P58304 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
VSX2P58304 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VSX2P58304 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.25□□□□□ -0.13
VSX2P58304 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VSX2P58304 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms