Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC078875.1-201ENST00000431907 724 ntBASIC14.22□□□□□ -0.13
CLDN6P56747 AC012362.1-201ENST00000434906 739 ntBASIC14.22□□□□□ -0.13
CLDN6P56747 PIN4P1-201ENST00000451079 396 ntBASIC14.22□□□□□ -0.13
CLDN6P56747 AC008723.1-201ENST00000506922 207 ntBASIC14.22□□□□□ -0.13
CLDN6P56747 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.22□□□□□ -0.13
CLDN6P56747 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN6P56747 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.22□□□□□ -0.13
CLDN6P56747 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN6P56747 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CLDN6P56747 AL161773.1-201ENST00000624845 863 ntBASIC14.22□□□□□ -0.13
CLDN6P56747 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN6P56747 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.22□□□□□ -0.13
CLDN6P56747 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN6P56747 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 REXO1L2P-201ENST00000425429 2069 ntBASIC14.22□□□□□ -0.13
CLDN6P56747 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN6P56747 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN6P56747 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.21□□□□□ -0.13
CLDN6P56747 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN6P56747 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN6P56747 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CLDN6P56747 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN6P56747 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN6P56747 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN6P56747 AL138725.1-201ENST00000407347 1314 ntBASIC14.21□□□□□ -0.13
CLDN6P56747 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN6P56747 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN6P56747 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN6P56747 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN6P56747 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.21□□□□□ -0.13
CLDN6P56747 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN6P56747 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN6P56747 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN6P56747 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN6P56747 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLDN6P56747 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN6P56747 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN6P56747 AC097065.1-201ENST00000425737 517 ntBASIC14.21□□□□□ -0.13
CLDN6P56747 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.21□□□□□ -0.13
CLDN6P56747 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.21□□□□□ -0.13
CLDN6P56747 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.21□□□□□ -0.13
CLDN6P56747 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.21□□□□□ -0.13
CLDN6P56747 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.21□□□□□ -0.13
CLDN6P56747 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.21□□□□□ -0.13
CLDN6P56747 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.21□□□□□ -0.13
CLDN6P56747 MIR4522-201ENST00000584932 87 ntBASIC14.21□□□□□ -0.13
CLDN6P56747 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.21□□□□□ -0.13
CLDN6P56747 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CLDN6P56747 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN6P56747 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN6P56747 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN6P56747 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN6P56747 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.21□□□□□ -0.14
CLDN6P56747 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN6P56747 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.21□□□□□ -0.14
CLDN6P56747 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN6P56747 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN6P56747 FAM90A2P-201ENST00000511144 1395 ntBASIC14.21□□□□□ -0.14
CLDN6P56747 FAM90A25P-201ENST00000528404 1395 ntBASIC14.21□□□□□ -0.14
CLDN6P56747 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.21□□□□□ -0.14
CLDN6P56747 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN6P56747 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLDN6P56747 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CLDN6P56747 FRMPD2B-201ENST00000431305 1347 ntBASIC14.2□□□□□ -0.14
CLDN6P56747 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CLDN6P56747 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 AC104640.1-201ENST00000562617 2109 ntBASIC14.2□□□□□ -0.14
CLDN6P56747 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLDN6P56747 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN6P56747 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CLDN6P56747 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 DBET-201ENST00000630918 3363 ntBASIC14.2□□□□□ -0.14
CLDN6P56747 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN6P56747 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CLDN6P56747 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 AL583805.1-201ENST00000391389 531 ntBASIC14.2□□□□□ -0.14
CLDN6P56747 RPL5P21-201ENST00000404620 815 ntBASIC14.2□□□□□ -0.14
CLDN6P56747 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN6P56747 FAM58BP-201ENST00000439056 645 ntBASIC14.2□□□□□ -0.14
CLDN6P56747 CICP12-201ENST00000455801 843 ntBASIC14.2□□□□□ -0.14
CLDN6P56747 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 MIR4649-201ENST00000582839 64 ntBASIC14.2□□□□□ -0.14
CLDN6P56747 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN6P56747 MIR6769A-201ENST00000617340 73 ntBASIC14.2□□□□□ -0.14
CLDN6P56747 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN6P56747 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms