Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CDH12P55289 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CDH12P55289 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH12P55289 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.91□□□□□ -0.18
CDH12P55289 HLA-K-203ENST00000430151 1046 ntBASIC13.91□□□□□ -0.18
CDH12P55289 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.91□□□□□ -0.18
CDH12P55289 RN7SL399P-201ENST00000471648 279 ntBASIC13.91□□□□□ -0.18
CDH12P55289 AC026410.3-201ENST00000514280 936 ntBASIC13.91□□□□□ -0.18
CDH12P55289 TPRX2P-201ENST00000535362 881 ntBASIC13.91□□□□□ -0.18
CDH12P55289 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH12P55289 AL049840.4-201ENST00000602422 811 ntBASIC13.91□□□□□ -0.18
CDH12P55289 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.91□□□□□ -0.18
CDH12P55289 AC107373.2-201ENST00000607735 490 ntBASIC13.91□□□□□ -0.18
CDH12P55289 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CDH12P55289 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CDH12P55289 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CDH12P55289 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CDH12P55289 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH12P55289 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.91□□□□□ -0.18
CDH12P55289 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 AL138799.1-201ENST00000448213 1675 ntBASIC13.91□□□□□ -0.18
CDH12P55289 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.91□□□□□ -0.18
CDH12P55289 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH12P55289 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.91□□□□□ -0.18
CDH12P55289 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH12P55289 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.9□□□□□ -0.18
CDH12P55289 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 AL158070.2-201ENST00000623713 1621 ntBASIC13.9□□□□□ -0.18
CDH12P55289 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 BASP1P1-201ENST00000430708 665 ntBASIC13.9□□□□□ -0.18
CDH12P55289 AL353779.1-201ENST00000434793 351 ntBASIC13.9□□□□□ -0.18
CDH12P55289 AC093214.1-201ENST00000511688 1107 ntBASIC13.9□□□□□ -0.18
CDH12P55289 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.9□□□□□ -0.18
CDH12P55289 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.9□□□□□ -0.18
CDH12P55289 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.9□□□□□ -0.18
CDH12P55289 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.9□□□□□ -0.18
CDH12P55289 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 AL662799.1-202ENST00000614205 422 ntBASIC13.9□□□□□ -0.18
CDH12P55289 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.9□□□□□ -0.18
CDH12P55289 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.9□□□□□ -0.18
CDH12P55289 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.9□□□□□ -0.18
CDH12P55289 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.9□□□□□ -0.18
CDH12P55289 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.9□□□□□ -0.18
CDH12P55289 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDH12P55289 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.9□□□□□ -0.18
CDH12P55289 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CDH12P55289 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH12P55289 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
CDH12P55289 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CDH12P55289 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH12P55289 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CDH12P55289 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CDH12P55289 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 AC016397.2-201ENST00000624848 1985 ntBASIC13.89□□□□□ -0.19
CDH12P55289 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CDH12P55289 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CDH12P55289 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH12P55289 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.89□□□□□ -0.19
CDH12P55289 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CDH12P55289 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CDH12P55289 SPDYE19P-201ENST00000338590 713 ntBASIC13.89□□□□□ -0.19
CDH12P55289 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CDH12P55289 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH12P55289 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.89□□□□□ -0.19
CDH12P55289 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.89□□□□□ -0.19
CDH12P55289 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.89□□□□□ -0.19
CDH12P55289 VDAC1P7-201ENST00000462417 847 ntBASIC13.89□□□□□ -0.19
CDH12P55289 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.89□□□□□ -0.19
CDH12P55289 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms