Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.99■□□□□ 0.47
NUP98P52948 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.99■□□□□ 0.47
NUP98P52948 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.99■□□□□ 0.47
NUP98P52948 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 AC019109.1-201ENST00000401725 1874 ntBASIC17.99■□□□□ 0.47
NUP98P52948 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUP98P52948 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUP98P52948 AC006372.4-201ENST00000624122 1543 ntBASIC17.98■□□□□ 0.47
NUP98P52948 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUP98P52948 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.98■□□□□ 0.47
NUP98P52948 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUP98P52948 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.98■□□□□ 0.47
NUP98P52948 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUP98P52948 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.98■□□□□ 0.47
NUP98P52948 EEF1DP2-201ENST00000433698 843 ntBASIC17.98■□□□□ 0.47
NUP98P52948 AC098934.1-203ENST00000442868 1262 ntBASIC17.98■□□□□ 0.47
NUP98P52948 TPT1P11-201ENST00000458482 498 ntBASIC17.98■□□□□ 0.47
NUP98P52948 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC17.98■□□□□ 0.47
NUP98P52948 RN7SL564P-201ENST00000496309 250 ntBASIC17.98■□□□□ 0.47
NUP98P52948 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC17.98■□□□□ 0.47
NUP98P52948 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUP98P52948 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NUP98P52948 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.98■□□□□ 0.47
NUP98P52948 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUP98P52948 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUP98P52948 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NUP98P52948 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUP98P52948 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUP98P52948 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.98■□□□□ 0.47
NUP98P52948 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.98■□□□□ 0.47
NUP98P52948 KRT8P43-201ENST00000406052 1458 ntBASIC17.98■□□□□ 0.47
NUP98P52948 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.98■□□□□ 0.47
NUP98P52948 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUP98P52948 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUP98P52948 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
NUP98P52948 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.98■□□□□ 0.47
NUP98P52948 MTHFR-210ENST00000641407 2387 ntBASIC17.98■□□□□ 0.47
NUP98P52948 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUP98P52948 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUP98P52948 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.98■□□□□ 0.47
NUP98P52948 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
NUP98P52948 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.98■□□□□ 0.47
NUP98P52948 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC17.98■□□□□ 0.47
NUP98P52948 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.98■□□□□ 0.47
NUP98P52948 AC009084.3-201ENST00000623356 437 ntBASIC17.98■□□□□ 0.47
NUP98P52948 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.97■□□□□ 0.47
NUP98P52948 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.97■□□□□ 0.47
NUP98P52948 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
NUP98P52948 CICP14-201ENST00000629111 2732 ntBASIC17.97■□□□□ 0.47
NUP98P52948 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
NUP98P52948 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 Z69890.1-201ENST00000382990 339 ntBASIC17.97■□□□□ 0.47
NUP98P52948 AC108734.2-201ENST00000420887 1069 ntBASIC17.97■□□□□ 0.47
NUP98P52948 AL139008.1-201ENST00000437894 228 ntBASIC17.97■□□□□ 0.47
NUP98P52948 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 NT5C-204ENST00000578337 582 ntTSL 2 BASIC17.97■□□□□ 0.47
NUP98P52948 RN7SL455P-201ENST00000580629 282 ntBASIC17.97■□□□□ 0.47
NUP98P52948 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC17.97■□□□□ 0.47
NUP98P52948 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC17.97■□□□□ 0.47
NUP98P52948 AC140113.1-201ENST00000603467 169 ntBASIC17.97■□□□□ 0.47
NUP98P52948 NAMA-206ENST00000605377 509 ntTSL 5 BASIC17.97■□□□□ 0.47
NUP98P52948 ST5-261ENST00000626808 1071 ntTSL 5 BASIC17.97■□□□□ 0.47
NUP98P52948 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NUP98P52948 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NUP98P52948 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.97■□□□□ 0.47
NUP98P52948 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUP98P52948 AC117503.4-201ENST00000623229 1418 ntBASIC17.97■□□□□ 0.47
NUP98P52948 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUP98P52948 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUP98P52948 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUP98P52948 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NUP98P52948 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUP98P52948 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC17.96■□□□□ 0.47
NUP98P52948 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC17.96■□□□□ 0.47
NUP98P52948 C2orf69P1-201ENST00000563532 1093 ntBASIC17.96■□□□□ 0.47
NUP98P52948 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.96■□□□□ 0.47
NUP98P52948 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NUP98P52948 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
NUP98P52948 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.96■□□□□ 0.47
NUP98P52948 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NUP98P52948 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUP98P52948 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.96■□□□□ 0.47
NUP98P52948 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms