Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF140P52738 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.72□□□□□ -0.05
ZNF140P52738 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.72□□□□□ -0.05
ZNF140P52738 AC027601.5-201ENST00000624065 2482 ntBASIC14.72□□□□□ -0.05
ZNF140P52738 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF140P52738 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF140P52738 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF140P52738 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF140P52738 SHC1P1-201ENST00000425230 1745 ntBASIC14.72□□□□□ -0.05
ZNF140P52738 AL023775.1-201ENST00000454907 1746 ntBASIC14.72□□□□□ -0.05
ZNF140P52738 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF140P52738 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF140P52738 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF140P52738 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF140P52738 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ZNF140P52738 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF140P52738 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ZNF140P52738 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.71□□□□□ -0.05
ZNF140P52738 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.71□□□□□ -0.05
ZNF140P52738 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
ZNF140P52738 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.71□□□□□ -0.05
ZNF140P52738 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.71□□□□□ -0.05
ZNF140P52738 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.71□□□□□ -0.05
ZNF140P52738 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.71□□□□□ -0.05
ZNF140P52738 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.71□□□□□ -0.05
ZNF140P52738 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.71□□□□□ -0.05
ZNF140P52738 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.71□□□□□ -0.05
ZNF140P52738 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.71□□□□□ -0.05
ZNF140P52738 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.71□□□□□ -0.05
ZNF140P52738 SORD2P-201ENST00000558556 1069 ntBASIC14.71□□□□□ -0.05
ZNF140P52738 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.71□□□□□ -0.05
ZNF140P52738 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.71□□□□□ -0.05
ZNF140P52738 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
ZNF140P52738 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.71□□□□□ -0.05
ZNF140P52738 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.71□□□□□ -0.05
ZNF140P52738 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 AC011498.7-201ENST00000624986 2027 ntBASIC14.71□□□□□ -0.05
ZNF140P52738 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZNF140P52738 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
ZNF140P52738 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.71□□□□□ -0.06
ZNF140P52738 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.71□□□□□ -0.06
ZNF140P52738 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.71□□□□□ -0.06
ZNF140P52738 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ZNF140P52738 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.7□□□□□ -0.06
ZNF140P52738 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.7□□□□□ -0.06
ZNF140P52738 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 AC012617.1-204ENST00000586340 2305 ntBASIC14.7□□□□□ -0.06
ZNF140P52738 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
ZNF140P52738 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ZNF140P52738 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.7□□□□□ -0.06
ZNF140P52738 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.7□□□□□ -0.06
ZNF140P52738 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ZNF140P52738 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 AC009093.10-201ENST00000641956 1442 ntBASIC14.7□□□□□ -0.06
ZNF140P52738 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.7□□□□□ -0.06
ZNF140P52738 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
ZNF140P52738 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ZNF140P52738 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.7□□□□□ -0.06
ZNF140P52738 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.7□□□□□ -0.06
ZNF140P52738 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.7□□□□□ -0.06
ZNF140P52738 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.7□□□□□ -0.06
ZNF140P52738 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.7□□□□□ -0.06
ZNF140P52738 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.7□□□□□ -0.06
ZNF140P52738 AP005482.1-201ENST00000563722 1273 ntBASIC14.7□□□□□ -0.06
ZNF140P52738 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.7□□□□□ -0.06
ZNF140P52738 MIR4259-201ENST00000584466 101 ntBASIC14.7□□□□□ -0.06
ZNF140P52738 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.7□□□□□ -0.06
ZNF140P52738 AC027601.3-201ENST00000622907 509 ntBASIC14.7□□□□□ -0.06
ZNF140P52738 COX11-210ENST00000639671 696 ntBASIC14.7□□□□□ -0.06
ZNF140P52738 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ZNF140P52738 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZNF140P52738 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms