Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.61□□□□□ -0.07
GTF2A1P52655 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 NUS1P2-201ENST00000417358 873 ntBASIC14.61□□□□□ -0.07
GTF2A1P52655 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.61□□□□□ -0.07
GTF2A1P52655 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.61□□□□□ -0.07
GTF2A1P52655 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.61□□□□□ -0.07
GTF2A1P52655 AC087163.2-201ENST00000457299 853 ntBASIC14.61□□□□□ -0.07
GTF2A1P52655 AC104819.1-201ENST00000504587 486 ntBASIC14.61□□□□□ -0.07
GTF2A1P52655 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.61□□□□□ -0.07
GTF2A1P52655 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
GTF2A1P52655 CYP2A7P1-201ENST00000595391 815 ntBASIC14.61□□□□□ -0.07
GTF2A1P52655 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 AC099336.1-202ENST00000602961 463 ntBASIC14.61□□□□□ -0.07
GTF2A1P52655 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
GTF2A1P52655 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.61□□□□□ -0.07
GTF2A1P52655 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC14.61□□□□□ -0.07
GTF2A1P52655 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC14.61□□□□□ -0.07
GTF2A1P52655 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
GTF2A1P52655 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.61□□□□□ -0.07
GTF2A1P52655 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.61□□□□□ -0.07
GTF2A1P52655 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.61□□□□□ -0.07
GTF2A1P52655 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.61□□□□□ -0.07
GTF2A1P52655 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
GTF2A1P52655 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC14.61□□□□□ -0.07
GTF2A1P52655 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
GTF2A1P52655 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
GTF2A1P52655 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
GTF2A1P52655 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC14.6□□□□□ -0.07
GTF2A1P52655 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
GTF2A1P52655 PPP2R1A-205ENST00000462990 2730 ntTSL 2 BASIC14.6□□□□□ -0.07
GTF2A1P52655 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.6□□□□□ -0.07
GTF2A1P52655 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC14.6□□□□□ -0.07
GTF2A1P52655 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.6□□□□□ -0.07
GTF2A1P52655 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GTF2A1P52655 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC14.6□□□□□ -0.07
GTF2A1P52655 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.6□□□□□ -0.07
GTF2A1P52655 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.6□□□□□ -0.07
GTF2A1P52655 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.6□□□□□ -0.07
GTF2A1P52655 AL139424.1-201ENST00000607572 797 ntBASIC14.6□□□□□ -0.07
GTF2A1P52655 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.6□□□□□ -0.07
GTF2A1P52655 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GTF2A1P52655 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.6□□□□□ -0.07
GTF2A1P52655 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.6□□□□□ -0.07
GTF2A1P52655 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GTF2A1P52655 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
GTF2A1P52655 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
GTF2A1P52655 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
GTF2A1P52655 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
GTF2A1P52655 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
GTF2A1P52655 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
GTF2A1P52655 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.59□□□□□ -0.07
GTF2A1P52655 TMPOP1-202ENST00000424642 1267 ntBASIC14.59□□□□□ -0.07
GTF2A1P52655 AL645939.2-201ENST00000427340 991 ntBASIC14.59□□□□□ -0.07
GTF2A1P52655 MIR3180-1-201ENST00000580374 94 ntBASIC14.59□□□□□ -0.07
GTF2A1P52655 MIR3180-3-201ENST00000584616 94 ntBASIC14.59□□□□□ -0.07
GTF2A1P52655 NKAPP1-205ENST00000585790 367 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms