Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNNI2P48788 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TNNI2P48788 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 AC046158.3-201ENST00000624947 2558 ntBASIC17.54■□□□□ 0.4
TNNI2P48788 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TNNI2P48788 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TNNI2P48788 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.54■□□□□ 0.4
TNNI2P48788 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TNNI2P48788 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 OR2K2-202ENST00000374428 1038 ntBASIC17.54■□□□□ 0.4
TNNI2P48788 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TNNI2P48788 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.54■□□□□ 0.4
TNNI2P48788 AC078991.1-201ENST00000437297 610 ntBASIC17.54■□□□□ 0.4
TNNI2P48788 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.54■□□□□ 0.4
TNNI2P48788 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.54■□□□□ 0.4
TNNI2P48788 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.54■□□□□ 0.4
TNNI2P48788 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TNNI2P48788 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.54■□□□□ 0.4
TNNI2P48788 NPM1P43-201ENST00000558669 786 ntBASIC17.54■□□□□ 0.4
TNNI2P48788 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TNNI2P48788 AL031713.1-201ENST00000564813 661 ntBASIC17.54■□□□□ 0.4
TNNI2P48788 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TNNI2P48788 LINC01783-202ENST00000614408 828 ntBASIC17.54■□□□□ 0.4
TNNI2P48788 BX284668.2-205ENST00000619677 828 ntBASIC17.54■□□□□ 0.4
TNNI2P48788 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.54■□□□□ 0.4
TNNI2P48788 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TNNI2P48788 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 AP002414.2-201ENST00000591780 3365 ntBASIC17.54■□□□□ 0.4
TNNI2P48788 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNNI2P48788 AC092384.3-202ENST00000564646 2873 ntBASIC17.54■□□□□ 0.4
TNNI2P48788 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 WASH3P-207ENST00000560956 1394 ntBASIC17.53■□□□□ 0.4
TNNI2P48788 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.53■□□□□ 0.4
TNNI2P48788 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TNNI2P48788 AC074138.1-201ENST00000611182 1303 ntBASIC17.53■□□□□ 0.4
TNNI2P48788 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TNNI2P48788 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.53■□□□□ 0.4
TNNI2P48788 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.53■□□□□ 0.4
TNNI2P48788 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.53■□□□□ 0.4
TNNI2P48788 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.53■□□□□ 0.4
TNNI2P48788 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 RPL8P2-201ENST00000430538 502 ntBASIC17.53■□□□□ 0.4
TNNI2P48788 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.53■□□□□ 0.4
TNNI2P48788 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 RN7SL8P-201ENST00000461771 266 ntBASIC17.53■□□□□ 0.4
TNNI2P48788 PGAM1P5-201ENST00000548011 764 ntBASIC17.53■□□□□ 0.4
TNNI2P48788 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.53■□□□□ 0.4
TNNI2P48788 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.53■□□□□ 0.4
TNNI2P48788 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.53■□□□□ 0.4
TNNI2P48788 MIR3188-201ENST00000583494 85 ntBASIC17.53■□□□□ 0.4
TNNI2P48788 AC092171.5-201ENST00000608012 942 ntBASIC17.53■□□□□ 0.4
TNNI2P48788 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TNNI2P48788 LINC00554-201ENST00000564841 3011 ntBASIC17.53■□□□□ 0.4
TNNI2P48788 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.53■□□□□ 0.4
TNNI2P48788 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.53■□□□□ 0.4
TNNI2P48788 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.53■□□□□ 0.4
TNNI2P48788 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.53■□□□□ 0.4
TNNI2P48788 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TNNI2P48788 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.53■□□□□ 0.4
TNNI2P48788 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNNI2P48788 CAP2P1-201ENST00000557743 1390 ntBASIC17.53■□□□□ 0.4
TNNI2P48788 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TNNI2P48788 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNNI2P48788 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms