Protein–RNA interactions for Protein: P42338

PIK3CB, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CBP42338 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3CBP42338 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.3□□□□□ -0.12
PIK3CBP42338 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3CBP42338 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3CBP42338 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3CBP42338 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PIK3CBP42338 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PIK3CBP42338 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
PIK3CBP42338 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
PIK3CBP42338 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PIK3CBP42338 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.29□□□□□ -0.12
PIK3CBP42338 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.29□□□□□ -0.12
PIK3CBP42338 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.29□□□□□ -0.12
PIK3CBP42338 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
PIK3CBP42338 AP001267.2-201ENST00000532619 2086 ntBASIC14.29□□□□□ -0.12
PIK3CBP42338 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PIK3CBP42338 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.29□□□□□ -0.12
PIK3CBP42338 TPM3P8-201ENST00000330554 643 ntBASIC14.29□□□□□ -0.12
PIK3CBP42338 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PIK3CBP42338 AC092933.1-201ENST00000393644 945 ntBASIC14.29□□□□□ -0.12
PIK3CBP42338 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.29□□□□□ -0.12
PIK3CBP42338 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.29□□□□□ -0.12
PIK3CBP42338 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.29□□□□□ -0.12
PIK3CBP42338 USP32P1-208ENST00000506594 1164 ntBASIC14.29□□□□□ -0.12
PIK3CBP42338 GCOM2-201ENST00000509133 1104 ntBASIC14.29□□□□□ -0.12
PIK3CBP42338 AP005018.1-201ENST00000525475 301 ntBASIC14.29□□□□□ -0.12
PIK3CBP42338 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.29□□□□□ -0.12
PIK3CBP42338 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PIK3CBP42338 AC233724.13-201ENST00000598383 410 ntBASIC14.29□□□□□ -0.12
PIK3CBP42338 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.29□□□□□ -0.12
PIK3CBP42338 AL022328.1-201ENST00000610050 478 ntBASIC14.29□□□□□ -0.12
PIK3CBP42338 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.29□□□□□ -0.12
PIK3CBP42338 MRPL37P1-201ENST00000592451 1337 ntBASIC14.29□□□□□ -0.12
PIK3CBP42338 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PIK3CBP42338 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.29□□□□□ -0.12
PIK3CBP42338 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
PIK3CBP42338 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.29□□□□□ -0.12
PIK3CBP42338 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PIK3CBP42338 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3CBP42338 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PIK3CBP42338 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PIK3CBP42338 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.28□□□□□ -0.12
PIK3CBP42338 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.28□□□□□ -0.12
PIK3CBP42338 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PIK3CBP42338 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
PIK3CBP42338 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.28□□□□□ -0.12
PIK3CBP42338 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.28□□□□□ -0.12
PIK3CBP42338 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.28□□□□□ -0.12
PIK3CBP42338 C2orf27AP3-201ENST00000434123 579 ntBASIC14.28□□□□□ -0.12
PIK3CBP42338 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 TTTY23B-201ENST00000442790 549 ntBASIC14.28□□□□□ -0.12
PIK3CBP42338 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.28□□□□□ -0.12
PIK3CBP42338 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.28□□□□□ -0.12
PIK3CBP42338 AP000593.2-201ENST00000542775 1433 ntBASIC14.28□□□□□ -0.12
PIK3CBP42338 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.28□□□□□ -0.12
PIK3CBP42338 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.28□□□□□ -0.12
PIK3CBP42338 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3CBP42338 AL136172.1-201ENST00000598590 1394 ntBASIC14.28□□□□□ -0.12
PIK3CBP42338 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.28□□□□□ -0.12
PIK3CBP42338 AL354718.3-201ENST00000616414 581 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms