Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC4P35249 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFC4P35249 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC4P35249 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC4P35249 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC4P35249 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RFC4P35249 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC4P35249 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFC4P35249 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFC4P35249 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.38■□□□□ 0.53
RFC4P35249 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC18.38■□□□□ 0.53
RFC4P35249 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC18.38■□□□□ 0.53
RFC4P35249 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RFC4P35249 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.38■□□□□ 0.53
RFC4P35249 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC4P35249 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.37■□□□□ 0.53
RFC4P35249 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 AC112693.3-201ENST00000624819 1983 ntBASIC18.37■□□□□ 0.53
RFC4P35249 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
RFC4P35249 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.37■□□□□ 0.53
RFC4P35249 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.37■□□□□ 0.53
RFC4P35249 RPL35P9-201ENST00000446059 350 ntBASIC18.37■□□□□ 0.53
RFC4P35249 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC18.37■□□□□ 0.53
RFC4P35249 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
RFC4P35249 OR5BD1P-201ENST00000532527 817 ntBASIC18.37■□□□□ 0.53
RFC4P35249 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 TEKT4P2-202ENST00000559466 1312 ntBASIC18.37■□□□□ 0.53
RFC4P35249 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC18.37■□□□□ 0.53
RFC4P35249 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.37■□□□□ 0.53
RFC4P35249 AC126365.1-201ENST00000578585 1514 ntBASIC18.37■□□□□ 0.53
RFC4P35249 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.37■□□□□ 0.53
RFC4P35249 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.37■□□□□ 0.53
RFC4P35249 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RFC4P35249 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.37■□□□□ 0.53
RFC4P35249 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC4P35249 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RFC4P35249 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.36■□□□□ 0.53
RFC4P35249 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 MIR645-201ENST00000385283 94 ntBASIC18.36■□□□□ 0.53
RFC4P35249 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RFC4P35249 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.36■□□□□ 0.53
RFC4P35249 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC18.36■□□□□ 0.53
RFC4P35249 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RFC4P35249 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC18.36■□□□□ 0.53
RFC4P35249 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC18.36■□□□□ 0.53
RFC4P35249 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.36■□□□□ 0.53
RFC4P35249 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.36■□□□□ 0.53
RFC4P35249 AC093909.3-201ENST00000504783 336 ntBASIC18.36■□□□□ 0.53
RFC4P35249 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC18.36■□□□□ 0.53
RFC4P35249 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC18.36■□□□□ 0.53
RFC4P35249 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 AC068867.1-201ENST00000559855 150 ntBASIC18.36■□□□□ 0.53
RFC4P35249 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC18.36■□□□□ 0.53
RFC4P35249 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.36■□□□□ 0.53
RFC4P35249 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RFC4P35249 RN7SL357P-201ENST00000581065 298 ntBASIC18.36■□□□□ 0.53
RFC4P35249 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC18.36■□□□□ 0.53
RFC4P35249 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.36■□□□□ 0.53
RFC4P35249 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
RFC4P35249 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.36■□□□□ 0.53
RFC4P35249 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.36■□□□□ 0.53
RFC4P35249 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC4P35249 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.35■□□□□ 0.53
RFC4P35249 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC18.35■□□□□ 0.53
RFC4P35249 AC139712.1-201ENST00000378256 1875 ntBASIC18.35■□□□□ 0.53
RFC4P35249 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC4P35249 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC4P35249 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC4P35249 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC4P35249 AC021305.1-201ENST00000520656 1514 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 282 ms