Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC19.59■□□□□ 0.73
USP6P35125 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
USP6P35125 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC19.59■□□□□ 0.73
USP6P35125 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC19.59■□□□□ 0.73
USP6P35125 AC018638.5-201ENST00000450885 754 ntBASIC19.59■□□□□ 0.73
USP6P35125 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC19.59■□□□□ 0.73
USP6P35125 ALG1L6P-201ENST00000515248 758 ntBASIC19.59■□□□□ 0.73
USP6P35125 AP003398.1-201ENST00000531124 318 ntBASIC19.59■□□□□ 0.73
USP6P35125 OR5BD1P-201ENST00000532527 817 ntBASIC19.59■□□□□ 0.73
USP6P35125 NAA40-205ENST00000539656 577 ntTSL 4 BASIC19.59■□□□□ 0.73
USP6P35125 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC19.59■□□□□ 0.73
USP6P35125 HERC2P11-201ENST00000562845 725 ntBASIC19.59■□□□□ 0.73
USP6P35125 NDUFB10P1-201ENST00000567319 521 ntBASIC19.59■□□□□ 0.73
USP6P35125 AC100756.2-201ENST00000569537 736 ntBASIC19.59■□□□□ 0.73
USP6P35125 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC19.59■□□□□ 0.73
USP6P35125 AC140113.1-201ENST00000603467 169 ntBASIC19.59■□□□□ 0.73
USP6P35125 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP6P35125 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.58■□□□□ 0.73
USP6P35125 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
USP6P35125 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.58■□□□□ 0.73
USP6P35125 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP6P35125 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP6P35125 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
USP6P35125 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP6P35125 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC19.58■□□□□ 0.72
USP6P35125 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC19.58■□□□□ 0.72
USP6P35125 AC064801.2-201ENST00000625052 1303 ntBASIC19.58■□□□□ 0.72
USP6P35125 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP6P35125 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP6P35125 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP6P35125 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
USP6P35125 BAX-205ENST00000391871 687 ntTSL 5 BASIC19.58■□□□□ 0.72
USP6P35125 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC19.58■□□□□ 0.72
USP6P35125 RPS23-204ENST00000507980 836 ntTSL 2 BASIC19.58■□□□□ 0.72
USP6P35125 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP6P35125 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC19.58■□□□□ 0.72
USP6P35125 AC007250.1-201ENST00000608934 338 ntBASIC19.58■□□□□ 0.72
USP6P35125 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC19.58■□□□□ 0.72
USP6P35125 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
USP6P35125 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP6P35125 USP4-203ENST00000415188 1454 ntTSL 3 BASIC19.58■□□□□ 0.72
USP6P35125 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.57■□□□□ 0.72
USP6P35125 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC19.57■□□□□ 0.72
USP6P35125 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC19.57■□□□□ 0.72
USP6P35125 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.57■□□□□ 0.72
USP6P35125 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP6P35125 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP6P35125 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
USP6P35125 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
USP6P35125 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
USP6P35125 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP6P35125 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC19.57■□□□□ 0.72
USP6P35125 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP6P35125 TEKT4P2-202ENST00000559466 1312 ntBASIC19.57■□□□□ 0.72
USP6P35125 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP6P35125 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.57■□□□□ 0.72
USP6P35125 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
USP6P35125 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP6P35125 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC19.57■□□□□ 0.72
USP6P35125 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP6P35125 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
USP6P35125 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP6P35125 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC19.57■□□□□ 0.72
USP6P35125 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC19.57■□□□□ 0.72
USP6P35125 AC098934.1-203ENST00000442868 1262 ntBASIC19.57■□□□□ 0.72
USP6P35125 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC19.57■□□□□ 0.72
USP6P35125 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC19.57■□□□□ 0.72
USP6P35125 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP6P35125 RN7SL357P-201ENST00000581065 298 ntBASIC19.57■□□□□ 0.72
USP6P35125 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC19.57■□□□□ 0.72
USP6P35125 NAMA-206ENST00000605377 509 ntTSL 5 BASIC19.57■□□□□ 0.72
USP6P35125 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP6P35125 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
USP6P35125 AL591122.2-201ENST00000624125 1853 ntBASIC19.57■□□□□ 0.72
USP6P35125 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP6P35125 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP6P35125 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC19.56■□□□□ 0.72
USP6P35125 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
USP6P35125 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
USP6P35125 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC19.56■□□□□ 0.72
USP6P35125 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC19.56■□□□□ 0.72
USP6P35125 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms