Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB4AP20338 AC136632.2-201ENST00000512891 861 ntBASIC11.47□□□□□ -0.57
RAB4AP20338 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.47□□□□□ -0.57
RAB4AP20338 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.47□□□□□ -0.57
RAB4AP20338 AC008608.2-201ENST00000606089 416 ntBASIC11.47□□□□□ -0.57
RAB4AP20338 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB4AP20338 FHL2-212ENST00000607522 759 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB4AP20338 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
RAB4AP20338 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RAB4AP20338 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RAB4AP20338 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
RAB4AP20338 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.47□□□□□ -0.57
RAB4AP20338 MTHFR-210ENST00000641407 2387 ntBASIC11.47□□□□□ -0.57
RAB4AP20338 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
RAB4AP20338 AC009093.2-202ENST00000620513 2079 ntBASIC11.47□□□□□ -0.57
RAB4AP20338 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
RAB4AP20338 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB4AP20338 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB4AP20338 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB4AP20338 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
RAB4AP20338 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 AC073548.1-201ENST00000624088 1882 ntBASIC11.46□□□□□ -0.57
RAB4AP20338 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
RAB4AP20338 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 AC080128.2-201ENST00000641520 11863 ntBASIC11.46□□□□□ -0.57
RAB4AP20338 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC11.46□□□□□ -0.57
RAB4AP20338 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.46□□□□□ -0.57
RAB4AP20338 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
RAB4AP20338 AC026992.2-203ENST00000563004 2419 ntBASIC11.46□□□□□ -0.57
RAB4AP20338 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.46□□□□□ -0.57
RAB4AP20338 AL691432.1-201ENST00000596308 1422 ntBASIC11.46□□□□□ -0.57
RAB4AP20338 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 AC107375.1-201ENST00000564464 2231 ntBASIC11.46□□□□□ -0.57
RAB4AP20338 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 PMS2P7-201ENST00000506558 1336 ntBASIC11.46□□□□□ -0.57
RAB4AP20338 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC11.46□□□□□ -0.57
RAB4AP20338 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
RAB4AP20338 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
RAB4AP20338 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
RAB4AP20338 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.46□□□□□ -0.57
RAB4AP20338 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
RAB4AP20338 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.46□□□□□ -0.57
RAB4AP20338 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.46□□□□□ -0.57
RAB4AP20338 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 AC021087.4-201ENST00000563761 564 ntBASIC11.46□□□□□ -0.57
RAB4AP20338 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.46□□□□□ -0.57
RAB4AP20338 OR7E47P-204ENST00000575924 449 ntBASIC11.46□□□□□ -0.57
RAB4AP20338 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.46□□□□□ -0.57
RAB4AP20338 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.46□□□□□ -0.57
RAB4AP20338 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.46□□□□□ -0.57
RAB4AP20338 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.46□□□□□ -0.57
RAB4AP20338 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RAB4AP20338 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
RAB4AP20338 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RAB4AP20338 ACE3P-201ENST00000423435 1973 ntBASIC11.46□□□□□ -0.58
RAB4AP20338 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
RAB4AP20338 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
RAB4AP20338 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
RAB4AP20338 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RAB4AP20338 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
RAB4AP20338 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RAB4AP20338 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RAB4AP20338 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.46□□□□□ -0.58
RAB4AP20338 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.46□□□□□ -0.58
RAB4AP20338 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RAB4AP20338 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RAB4AP20338 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC11.46□□□□□ -0.58
RAB4AP20338 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms