Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD53P19397 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD53P19397 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.59□□□□□ -0.23
CD53P19397 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
CD53P19397 CR383656.2-201ENST00000548656 2254 ntBASIC13.59□□□□□ -0.23
CD53P19397 AC005252.3-201ENST00000623855 2258 ntBASIC13.59□□□□□ -0.23
CD53P19397 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.59□□□□□ -0.23
CD53P19397 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CD53P19397 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CD53P19397 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CD53P19397 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.58□□□□□ -0.23
CD53P19397 REXO1L4P-201ENST00000605109 1937 ntBASIC13.58□□□□□ -0.23
CD53P19397 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.58□□□□□ -0.23
CD53P19397 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.58□□□□□ -0.23
CD53P19397 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.58□□□□□ -0.23
CD53P19397 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CD53P19397 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
CD53P19397 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.58□□□□□ -0.24
CD53P19397 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.58□□□□□ -0.24
CD53P19397 AC092933.1-201ENST00000393644 945 ntBASIC13.58□□□□□ -0.24
CD53P19397 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.58□□□□□ -0.24
CD53P19397 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.58□□□□□ -0.24
CD53P19397 CSF2RBP1-201ENST00000447905 391 ntBASIC13.58□□□□□ -0.24
CD53P19397 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.58□□□□□ -0.24
CD53P19397 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.58□□□□□ -0.24
CD53P19397 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.58□□□□□ -0.24
CD53P19397 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.58□□□□□ -0.24
CD53P19397 AC015910.1-201ENST00000579400 975 ntBASIC13.58□□□□□ -0.24
CD53P19397 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.58□□□□□ -0.24
CD53P19397 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.58□□□□□ -0.24
CD53P19397 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CD53P19397 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.58□□□□□ -0.24
CD53P19397 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.58□□□□□ -0.24
CD53P19397 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.58□□□□□ -0.24
CD53P19397 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
CD53P19397 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CD53P19397 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD53P19397 AC020907.1-201ENST00000616460 1350 ntBASIC13.58□□□□□ -0.24
CD53P19397 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CD53P19397 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.57□□□□□ -0.24
CD53P19397 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CD53P19397 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
CD53P19397 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.57□□□□□ -0.24
CD53P19397 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.57□□□□□ -0.24
CD53P19397 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.57□□□□□ -0.24
CD53P19397 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD53P19397 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD53P19397 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD53P19397 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD53P19397 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.57□□□□□ -0.24
CD53P19397 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD53P19397 LINC00538-201ENST00000626109 1906 ntBASIC13.57□□□□□ -0.24
CD53P19397 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD53P19397 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CD53P19397 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.57□□□□□ -0.24
CD53P19397 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD53P19397 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
CD53P19397 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD53P19397 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD53P19397 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.57□□□□□ -0.24
CD53P19397 BCYRN1-201ENST00000418539 200 ntBASIC13.57□□□□□ -0.24
CD53P19397 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.57□□□□□ -0.24
CD53P19397 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.57□□□□□ -0.24
CD53P19397 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CD53P19397 FO681548.1-201ENST00000455617 1132 ntBASIC13.57□□□□□ -0.24
CD53P19397 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.57□□□□□ -0.24
CD53P19397 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.57□□□□□ -0.24
CD53P19397 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.57□□□□□ -0.24
CD53P19397 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CD53P19397 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.57□□□□□ -0.24
CD53P19397 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.57□□□□□ -0.24
CD53P19397 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.57□□□□□ -0.24
CD53P19397 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.57□□□□□ -0.24
CD53P19397 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD53P19397 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.57□□□□□ -0.24
CD53P19397 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.57□□□□□ -0.24
CD53P19397 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD53P19397 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD53P19397 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CD53P19397 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms