Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.03■□□□□ -0
VCLP18206 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.03■□□□□ -0
VCLP18206 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.03■□□□□ -0
VCLP18206 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
VCLP18206 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
VCLP18206 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
VCLP18206 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
VCLP18206 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
VCLP18206 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.02■□□□□ -0
VCLP18206 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.02■□□□□ -0
VCLP18206 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
VCLP18206 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.02■□□□□ -0
VCLP18206 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.02■□□□□ -0
VCLP18206 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.02■□□□□ -0
VCLP18206 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 ACTBP8-201ENST00000403258 1108 ntBASIC15.02■□□□□ -0
VCLP18206 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.02■□□□□ -0
VCLP18206 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.02■□□□□ -0
VCLP18206 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.02■□□□□ -0
VCLP18206 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.02■□□□□ -0
VCLP18206 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.02■□□□□ -0
VCLP18206 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.02■□□□□ -0
VCLP18206 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.02■□□□□ -0
VCLP18206 AC017083.2-201ENST00000608069 979 ntBASIC15.02■□□□□ -0
VCLP18206 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VCLP18206 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VCLP18206 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VCLP18206 ST20-AS1-201ENST00000560255 4223 ntBASIC15.02□□□□□ -0.01
VCLP18206 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
VCLP18206 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.02□□□□□ -0.01
VCLP18206 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.02□□□□□ -0.01
VCLP18206 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.02□□□□□ -0.01
VCLP18206 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VCLP18206 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VCLP18206 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
VCLP18206 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
VCLP18206 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VCLP18206 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.02□□□□□ -0.01
VCLP18206 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.02□□□□□ -0.01
VCLP18206 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
VCLP18206 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
VCLP18206 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.01□□□□□ -0.01
VCLP18206 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
VCLP18206 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VCLP18206 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 RNU1-114P-201ENST00000365297 166 ntBASIC15.01□□□□□ -0.01
VCLP18206 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
VCLP18206 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.01□□□□□ -0.01
VCLP18206 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
VCLP18206 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
VCLP18206 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.01□□□□□ -0.01
VCLP18206 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.01□□□□□ -0.01
VCLP18206 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 AL603764.1-201ENST00000636452 321 ntBASIC15.01□□□□□ -0.01
VCLP18206 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
VCLP18206 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.01□□□□□ -0.01
VCLP18206 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VCLP18206 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.01□□□□□ -0.01
VCLP18206 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.01□□□□□ -0.01
VCLP18206 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
VCLP18206 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.01□□□□□ -0.01
VCLP18206 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.01□□□□□ -0.01
VCLP18206 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VCLP18206 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms