Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ERCC2P18074 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 AC015688.4-201ENST00000580780 1647 ntBASIC15.28■□□□□ 0.04
ERCC2P18074 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.28■□□□□ 0.04
ERCC2P18074 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ERCC2P18074 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 OR2I1P-209ENST00000641730 5365 ntBASIC15.27■□□□□ 0.04
ERCC2P18074 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.27■□□□□ 0.04
ERCC2P18074 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 AL136379.1-201ENST00000623471 2642 ntBASIC15.27■□□□□ 0.04
ERCC2P18074 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
ERCC2P18074 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.27■□□□□ 0.04
ERCC2P18074 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.27■□□□□ 0.04
ERCC2P18074 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.27■□□□□ 0.04
ERCC2P18074 GPR53P-205ENST00000457298 1084 ntBASIC15.27■□□□□ 0.04
ERCC2P18074 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.27■□□□□ 0.04
ERCC2P18074 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.27■□□□□ 0.04
ERCC2P18074 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.27■□□□□ 0.04
ERCC2P18074 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.27■□□□□ 0.04
ERCC2P18074 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
ERCC2P18074 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.27■□□□□ 0.04
ERCC2P18074 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.27■□□□□ 0.04
ERCC2P18074 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.27■□□□□ 0.04
ERCC2P18074 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ERCC2P18074 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ERCC2P18074 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ERCC2P18074 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.27■□□□□ 0.03
ERCC2P18074 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ERCC2P18074 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ERCC2P18074 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ERCC2P18074 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
ERCC2P18074 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ERCC2P18074 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ERCC2P18074 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ERCC2P18074 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
ERCC2P18074 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.27■□□□□ 0.03
ERCC2P18074 KRT8P4-201ENST00000509735 1454 ntBASIC15.27■□□□□ 0.03
ERCC2P18074 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ERCC2P18074 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ERCC2P18074 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.26■□□□□ 0.03
ERCC2P18074 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.26■□□□□ 0.03
ERCC2P18074 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.26■□□□□ 0.03
ERCC2P18074 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.26■□□□□ 0.03
ERCC2P18074 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ERCC2P18074 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 AL136309.1-201ENST00000403917 691 ntBASIC15.26■□□□□ 0.03
ERCC2P18074 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.26■□□□□ 0.03
ERCC2P18074 PUDPP3-201ENST00000445368 636 ntBASIC15.26■□□□□ 0.03
ERCC2P18074 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.26■□□□□ 0.03
ERCC2P18074 AC079316.1-201ENST00000548397 411 ntBASIC15.26■□□□□ 0.03
ERCC2P18074 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.26■□□□□ 0.03
ERCC2P18074 AC103988.2-201ENST00000561804 725 ntBASIC15.26■□□□□ 0.03
ERCC2P18074 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.26■□□□□ 0.03
ERCC2P18074 AC005089.1-201ENST00000619486 2241 ntBASIC15.26■□□□□ 0.03
ERCC2P18074 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
ERCC2P18074 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.26■□□□□ 0.03
ERCC2P18074 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ERCC2P18074 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ERCC2P18074 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms