Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PRKCAP17252 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 ACE3P-201ENST00000423435 1973 ntBASIC13.85□□□□□ -0.19
PRKCAP17252 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 AC136759.1-202ENST00000530858 2194 ntBASIC13.85□□□□□ -0.19
PRKCAP17252 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PRKCAP17252 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.85□□□□□ -0.19
PRKCAP17252 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.85□□□□□ -0.19
PRKCAP17252 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.85□□□□□ -0.19
PRKCAP17252 RNU1-114P-201ENST00000365297 166 ntBASIC13.85□□□□□ -0.19
PRKCAP17252 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.85□□□□□ -0.19
PRKCAP17252 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PRKCAP17252 AL139094.1-201ENST00000405549 1188 ntBASIC13.85□□□□□ -0.19
PRKCAP17252 HLA-K-203ENST00000430151 1046 ntBASIC13.85□□□□□ -0.19
PRKCAP17252 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 RN7SL752P-201ENST00000463779 287 ntBASIC13.85□□□□□ -0.19
PRKCAP17252 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
PRKCAP17252 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PRKCAP17252 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 AP005018.1-201ENST00000525475 301 ntBASIC13.85□□□□□ -0.19
PRKCAP17252 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.85□□□□□ -0.19
PRKCAP17252 AL596325.1-201ENST00000563991 1082 ntBASIC13.85□□□□□ -0.19
PRKCAP17252 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 AL358472.5-202ENST00000641448 1267 ntBASIC13.85□□□□□ -0.19
PRKCAP17252 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.85□□□□□ -0.19
PRKCAP17252 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.85□□□□□ -0.19
PRKCAP17252 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.85□□□□□ -0.19
PRKCAP17252 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.85□□□□□ -0.19
PRKCAP17252 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 AJ011931.1-201ENST00000618749 2492 ntBASIC13.85□□□□□ -0.19
PRKCAP17252 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.85□□□□□ -0.19
PRKCAP17252 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRKCAP17252 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
PRKCAP17252 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRKCAP17252 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PRKCAP17252 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRKCAP17252 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
PRKCAP17252 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.84□□□□□ -0.19
PRKCAP17252 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
PRKCAP17252 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.84□□□□□ -0.19
PRKCAP17252 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PRKCAP17252 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRKCAP17252 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PRKCAP17252 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PRKCAP17252 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.84□□□□□ -0.19
PRKCAP17252 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.84□□□□□ -0.19
PRKCAP17252 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.84□□□□□ -0.19
PRKCAP17252 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRKCAP17252 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRKCAP17252 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRKCAP17252 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.84□□□□□ -0.19
PRKCAP17252 ACKR1-201ENST00000368121 1240 ntBASIC13.84□□□□□ -0.19
PRKCAP17252 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PRKCAP17252 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
PRKCAP17252 AL035633.1-201ENST00000406139 838 ntBASIC13.84□□□□□ -0.19
PRKCAP17252 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRKCAP17252 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.84□□□□□ -0.19
PRKCAP17252 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.84□□□□□ -0.19
PRKCAP17252 AC011495.1-201ENST00000498085 584 ntBASIC13.84□□□□□ -0.19
PRKCAP17252 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PRKCAP17252 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms