Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MESTP3-201ENST00000503460 968 ntBASIC13.34□□□□□ -0.27
HLA-DOBP13765 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 RN7SL48P-201ENST00000579283 293 ntBASIC13.34□□□□□ -0.27
HLA-DOBP13765 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 BTNL10-201ENST00000595971 695 ntBASIC13.34□□□□□ -0.27
HLA-DOBP13765 AC233724.13-201ENST00000598383 410 ntBASIC13.34□□□□□ -0.27
HLA-DOBP13765 ECM1P1-201ENST00000604092 1279 ntBASIC13.34□□□□□ -0.27
HLA-DOBP13765 AC244669.2-201ENST00000612320 853 ntBASIC13.34□□□□□ -0.27
HLA-DOBP13765 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 AC138466.3-201ENST00000619983 221 ntBASIC13.34□□□□□ -0.27
HLA-DOBP13765 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 FKBP4P6-201ENST00000457486 1332 ntBASIC13.34□□□□□ -0.27
HLA-DOBP13765 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
HLA-DOBP13765 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DOBP13765 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DOBP13765 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DOBP13765 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DOBP13765 AGGF1P1-201ENST00000509500 2073 ntBASIC13.33□□□□□ -0.27
HLA-DOBP13765 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 AL391280.1-201ENST00000506969 1062 ntBASIC13.33□□□□□ -0.28
HLA-DOBP13765 AC022447.6-201ENST00000515522 438 ntBASIC13.33□□□□□ -0.28
HLA-DOBP13765 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 LINC02084-201ENST00000606069 1096 ntBASIC13.33□□□□□ -0.28
HLA-DOBP13765 AC138696.2-201ENST00000607376 223 ntBASIC13.33□□□□□ -0.28
HLA-DOBP13765 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DOBP13765 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DOBP13765 AL136172.1-201ENST00000598590 1394 ntBASIC13.32□□□□□ -0.28
HLA-DOBP13765 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 AC015802.1-201ENST00000588104 1449 ntBASIC13.32□□□□□ -0.28
HLA-DOBP13765 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 AC009093.2-202ENST00000620513 2079 ntBASIC13.32□□□□□ -0.28
HLA-DOBP13765 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms