Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL11A1P12107 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
COL11A1P12107 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL11A1P12107 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.44■□□□□ 0.22
COL11A1P12107 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL11A1P12107 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL11A1P12107 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL11A1P12107 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL11A1P12107 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.44■□□□□ 0.22
COL11A1P12107 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.44■□□□□ 0.22
COL11A1P12107 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL11A1P12107 LYPLA2P1-203ENST00000447689 696 ntBASIC16.44■□□□□ 0.22
COL11A1P12107 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.44■□□□□ 0.22
COL11A1P12107 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.44■□□□□ 0.22
COL11A1P12107 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.44■□□□□ 0.22
COL11A1P12107 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.44■□□□□ 0.22
COL11A1P12107 HERC2P11-201ENST00000562845 725 ntBASIC16.44■□□□□ 0.22
COL11A1P12107 AC100756.2-201ENST00000569537 736 ntBASIC16.44■□□□□ 0.22
COL11A1P12107 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
COL11A1P12107 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.44■□□□□ 0.22
COL11A1P12107 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.44■□□□□ 0.22
COL11A1P12107 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.44■□□□□ 0.22
COL11A1P12107 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
COL11A1P12107 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COL11A1P12107 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL11A1P12107 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL11A1P12107 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.44■□□□□ 0.22
COL11A1P12107 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.44■□□□□ 0.22
COL11A1P12107 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL11A1P12107 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.44■□□□□ 0.22
COL11A1P12107 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL11A1P12107 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.43■□□□□ 0.22
COL11A1P12107 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL11A1P12107 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL11A1P12107 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.43■□□□□ 0.22
COL11A1P12107 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
COL11A1P12107 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL11A1P12107 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.43■□□□□ 0.22
COL11A1P12107 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.43■□□□□ 0.22
COL11A1P12107 TPT1P11-201ENST00000458482 498 ntBASIC16.43■□□□□ 0.22
COL11A1P12107 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL11A1P12107 AC002044.2-201ENST00000624910 970 ntBASIC16.43■□□□□ 0.22
COL11A1P12107 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
COL11A1P12107 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL11A1P12107 AC011498.7-201ENST00000624986 2027 ntBASIC16.43■□□□□ 0.22
COL11A1P12107 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL11A1P12107 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL11A1P12107 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.43■□□□□ 0.22
COL11A1P12107 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL11A1P12107 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL11A1P12107 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.43■□□□□ 0.22
COL11A1P12107 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL11A1P12107 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.43■□□□□ 0.22
COL11A1P12107 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
COL11A1P12107 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL11A1P12107 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL11A1P12107 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL11A1P12107 AC006987.1-201ENST00000413610 527 ntBASIC16.42■□□□□ 0.22
COL11A1P12107 GUSBP10-201ENST00000417412 665 ntBASIC16.42■□□□□ 0.22
COL11A1P12107 EEF1DP2-201ENST00000433698 843 ntBASIC16.42■□□□□ 0.22
COL11A1P12107 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.42■□□□□ 0.22
COL11A1P12107 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.42■□□□□ 0.22
COL11A1P12107 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.42■□□□□ 0.22
COL11A1P12107 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL11A1P12107 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
COL11A1P12107 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL11A1P12107 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
COL11A1P12107 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.42■□□□□ 0.22
COL11A1P12107 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
COL11A1P12107 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
COL11A1P12107 FGD5P1-202ENST00000614866 2498 ntBASIC16.42■□□□□ 0.22
COL11A1P12107 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL11A1P12107 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
COL11A1P12107 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL11A1P12107 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
COL11A1P12107 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.42■□□□□ 0.22
COL11A1P12107 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.42■□□□□ 0.22
COL11A1P12107 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL11A1P12107 AP000911.2-201ENST00000534330 502 ntBASIC16.42■□□□□ 0.22
COL11A1P12107 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
COL11A1P12107 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.42■□□□□ 0.22
COL11A1P12107 SIGLEC22P-201ENST00000599104 714 ntBASIC16.42■□□□□ 0.22
COL11A1P12107 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.42■□□□□ 0.22
COL11A1P12107 AP000322.3-201ENST00000608665 388 ntBASIC16.42■□□□□ 0.22
COL11A1P12107 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.42■□□□□ 0.22
COL11A1P12107 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.41■□□□□ 0.22
COL11A1P12107 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
COL11A1P12107 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.41■□□□□ 0.22
COL11A1P12107 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COL11A1P12107 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL11A1P12107 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL11A1P12107 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.41■□□□□ 0.22
COL11A1P12107 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL11A1P12107 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COL11A1P12107 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.41■□□□□ 0.22
COL11A1P12107 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
COL11A1P12107 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.41■□□□□ 0.22
COL11A1P12107 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.41■□□□□ 0.22
COL11A1P12107 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.41■□□□□ 0.22
COL11A1P12107 LINC00634-202ENST00000505157 222 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms