Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LAMP1P11279 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.09□□□□□ -0.15
LAMP1P11279 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LAMP1P11279 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
LAMP1P11279 AC236430.1-201ENST00000402231 743 ntBASIC14.09□□□□□ -0.15
LAMP1P11279 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.09□□□□□ -0.15
LAMP1P11279 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LAMP1P11279 AC002472.2-201ENST00000442739 958 ntBASIC14.09□□□□□ -0.15
LAMP1P11279 BCRP1-201ENST00000444246 691 ntBASIC14.09□□□□□ -0.15
LAMP1P11279 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LAMP1P11279 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LAMP1P11279 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.09□□□□□ -0.15
LAMP1P11279 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LAMP1P11279 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
LAMP1P11279 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.09□□□□□ -0.15
LAMP1P11279 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 AC104581.4-201ENST00000623126 3052 ntBASIC14.09□□□□□ -0.15
LAMP1P11279 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LAMP1P11279 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.09□□□□□ -0.15
LAMP1P11279 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
LAMP1P11279 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LAMP1P11279 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.09□□□□□ -0.15
LAMP1P11279 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMP1P11279 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LAMP1P11279 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
LAMP1P11279 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LAMP1P11279 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LAMP1P11279 AC015688.4-201ENST00000580780 1647 ntBASIC14.08□□□□□ -0.15
LAMP1P11279 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.08□□□□□ -0.15
LAMP1P11279 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
LAMP1P11279 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
LAMP1P11279 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LAMP1P11279 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LAMP1P11279 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.08□□□□□ -0.16
LAMP1P11279 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.08□□□□□ -0.16
LAMP1P11279 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.08□□□□□ -0.16
LAMP1P11279 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.08□□□□□ -0.16
LAMP1P11279 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 AC009486.1-201ENST00000569860 813 ntBASIC14.08□□□□□ -0.16
LAMP1P11279 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.08□□□□□ -0.16
LAMP1P11279 AL096865.1-201ENST00000606796 927 ntBASIC14.08□□□□□ -0.16
LAMP1P11279 AL033527.5-201ENST00000641382 801 ntBASIC14.08□□□□□ -0.16
LAMP1P11279 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
LAMP1P11279 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.08□□□□□ -0.16
LAMP1P11279 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LAMP1P11279 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 MST1P2-201ENST00000457982 2291 ntBASIC14.08□□□□□ -0.16
LAMP1P11279 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LAMP1P11279 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.08□□□□□ -0.16
LAMP1P11279 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.08□□□□□ -0.16
LAMP1P11279 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.08□□□□□ -0.16
LAMP1P11279 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.08□□□□□ -0.16
LAMP1P11279 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMP1P11279 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LAMP1P11279 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.08□□□□□ -0.16
LAMP1P11279 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.08□□□□□ -0.16
LAMP1P11279 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms