Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MYCNP04198 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
MYCNP04198 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MYCNP04198 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.68■□□□□ 0.42
MYCNP04198 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.67■□□□□ 0.42
MYCNP04198 ZCCHC9-202ENST00000380199 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
MYCNP04198 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.67■□□□□ 0.42
MYCNP04198 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 REXO1L8P-201ENST00000604378 1897 ntBASIC17.67■□□□□ 0.42
MYCNP04198 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.67■□□□□ 0.42
MYCNP04198 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
MYCNP04198 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MYCNP04198 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
MYCNP04198 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
MYCNP04198 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.67■□□□□ 0.42
MYCNP04198 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC17.67■□□□□ 0.42
MYCNP04198 LINC01715-202ENST00000427804 688 ntTSL 5 BASIC17.67■□□□□ 0.42
MYCNP04198 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 AC104306.2-201ENST00000451877 341 ntBASIC17.67■□□□□ 0.42
MYCNP04198 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC17.67■□□□□ 0.42
MYCNP04198 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.67■□□□□ 0.42
MYCNP04198 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.67■□□□□ 0.42
MYCNP04198 AP001582.1-201ENST00000525856 295 ntBASIC17.67■□□□□ 0.42
MYCNP04198 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC17.67■□□□□ 0.42
MYCNP04198 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC17.67■□□□□ 0.42
MYCNP04198 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 AC139697.1-201ENST00000548429 745 ntBASIC17.67■□□□□ 0.42
MYCNP04198 AL163195.2-203ENST00000553604 573 ntTSL 4 BASIC17.67■□□□□ 0.42
MYCNP04198 PSMA3-AS1-208ENST00000555275 903 ntTSL 2 BASIC17.67■□□□□ 0.42
MYCNP04198 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.67■□□□□ 0.42
MYCNP04198 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC17.67■□□□□ 0.42
MYCNP04198 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC17.67■□□□□ 0.42
MYCNP04198 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.67■□□□□ 0.42
MYCNP04198 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.67■□□□□ 0.42
MYCNP04198 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 AC134407.2-201ENST00000625089 1978 ntBASIC17.67■□□□□ 0.42
MYCNP04198 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MYCNP04198 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MYCNP04198 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
MYCNP04198 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
MYCNP04198 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.67■□□□□ 0.42
MYCNP04198 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
MYCNP04198 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.67■□□□□ 0.42
MYCNP04198 LINC02071-201ENST00000514726 1723 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MYCNP04198 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
MYCNP04198 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MYCNP04198 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MYCNP04198 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.66■□□□□ 0.42
MYCNP04198 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MYCNP04198 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.66■□□□□ 0.42
MYCNP04198 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.66■□□□□ 0.42
MYCNP04198 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MYCNP04198 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MYCNP04198 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
MYCNP04198 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MYCNP04198 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
MYCNP04198 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.66■□□□□ 0.42
MYCNP04198 RPL31-202ENST00000409000 641 ntTSL 2 BASIC17.66■□□□□ 0.42
MYCNP04198 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.66■□□□□ 0.42
MYCNP04198 SLC25A24P2-201ENST00000415059 510 ntBASIC17.66■□□□□ 0.42
MYCNP04198 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.66■□□□□ 0.42
MYCNP04198 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.66■□□□□ 0.42
MYCNP04198 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MYCNP04198 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.66■□□□□ 0.42
MYCNP04198 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC17.66■□□□□ 0.42
MYCNP04198 IGHJ2P-201ENST00000454480 60 ntBASIC17.66■□□□□ 0.42
MYCNP04198 KRT8P13-201ENST00000463294 1010 ntBASIC17.66■□□□□ 0.42
MYCNP04198 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MYCNP04198 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.66■□□□□ 0.42
MYCNP04198 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.66■□□□□ 0.42
MYCNP04198 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC17.66■□□□□ 0.42
MYCNP04198 AL021578.1-201ENST00000613646 709 ntBASIC17.66■□□□□ 0.42
MYCNP04198 AL354809.1-201ENST00000618106 716 ntTSL 3 BASIC17.66■□□□□ 0.42
MYCNP04198 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.66■□□□□ 0.42
MYCNP04198 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.66■□□□□ 0.42
MYCNP04198 LIAS-210ENST00000638451 1159 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms