Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 AC079316.1-201ENST00000548397 411 ntBASIC13.09□□□□□ -0.31
NPIPB4C9JG80 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 AC005586.2-201ENST00000563946 837 ntBASIC13.09□□□□□ -0.31
NPIPB4C9JG80 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 AC244669.2-201ENST00000612320 853 ntBASIC13.09□□□□□ -0.31
NPIPB4C9JG80 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 AHCYP2-201ENST00000430630 1300 ntBASIC13.09□□□□□ -0.31
NPIPB4C9JG80 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPB4C9JG80 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPB4C9JG80 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
NPIPB4C9JG80 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 AL161932.2-201ENST00000435436 679 ntBASIC13.08□□□□□ -0.32
NPIPB4C9JG80 CHMP1AP1-201ENST00000445563 662 ntBASIC13.08□□□□□ -0.32
NPIPB4C9JG80 CICP12-201ENST00000455801 843 ntBASIC13.08□□□□□ -0.32
NPIPB4C9JG80 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 AC027601.3-201ENST00000622907 509 ntBASIC13.08□□□□□ -0.32
NPIPB4C9JG80 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 AC011498.7-201ENST00000624986 2027 ntBASIC13.08□□□□□ -0.32
NPIPB4C9JG80 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms