Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 PDIA3P1-201ENST00000471856 1510 ntBASIC15.16■□□□□ 0.02
CAPN8A6NHC0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 AC140479.7-201ENST00000636301 2332 ntBASIC15.16■□□□□ 0.02
CAPN8A6NHC0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.16■□□□□ 0.02
CAPN8A6NHC0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.15■□□□□ 0.02
CAPN8A6NHC0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 AC132938.4-201ENST00000623835 848 ntBASIC15.15■□□□□ 0.02
CAPN8A6NHC0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.15■□□□□ 0.02
CAPN8A6NHC0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 POM121L8P-201ENST00000417732 1281 ntBASIC15.14■□□□□ 0.01
CAPN8A6NHC0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 GOLGA2P4-201ENST00000441462 777 ntBASIC15.14■□□□□ 0.01
CAPN8A6NHC0 POM121L9P-203ENST00000441984 1285 ntBASIC15.14■□□□□ 0.01
CAPN8A6NHC0 AL590640.2-201ENST00000457038 527 ntBASIC15.14■□□□□ 0.01
CAPN8A6NHC0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.14■□□□□ 0.01
CAPN8A6NHC0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms