Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC025183.3-201ENST00000623526 1482 ntBASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 PGAM1P12-201ENST00000505622 748 ntBASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 AL118516.1-201ENST00000564152 670 ntBASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LOC102724428A0A0B4J2F2 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LOC102724428A0A0B4J2F2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LOC102724428A0A0B4J2F2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LOC102724428A0A0B4J2F2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC18.52■□□□□ 0.55
LOC102724428A0A0B4J2F2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
LOC102724428A0A0B4J2F2 AGGF1P1-201ENST00000509500 2073 ntBASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 KRT17P4-201ENST00000429445 819 ntBASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC226150.1-201ENST00000544259 466 ntBASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LOC102724428A0A0B4J2F2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC015688.4-201ENST00000580780 1647 ntBASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC095040.1-201ENST00000513286 675 ntBASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC008894.3-201ENST00000624324 3103 ntBASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC102724428A0A0B4J2F2 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms