Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 AL008718.2-201ENST00000609206 1313 ntBASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 AC046158.3-201ENST00000624947 2558 ntBASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CTDP1Q9Y5B0 AC138969.2-201ENST00000532739 9932 ntBASIC17.14■□□□□ 0.34
CTDP1Q9Y5B0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CTDP1Q9Y5B0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 MIR3619-201ENST00000579667 83 ntBASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 AC005324.6-201ENST00000587972 613 ntBASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 AL645939.5-201ENST00000606834 243 ntBASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 AC091812.3-201ENST00000621362 345 ntBASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 AC027601.3-201ENST00000622907 509 ntBASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTDP1Q9Y5B0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 AL157791.1-201ENST00000553667 1699 ntBASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 AC007950.2-201ENST00000615045 2347 ntBASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 AC092506.1-202ENST00000401022 528 ntBASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 AL035414.1-201ENST00000451327 857 ntBASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 MARK2P5-201ENST00000507649 634 ntBASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 AC090857.1-201ENST00000527400 390 ntBASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 NAP1L6-202ENST00000641404 1222 ntBASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 AC244394.1-201ENST00000435000 1665 ntBASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.13■□□□□ 0.33
CTDP1Q9Y5B0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms